RNA–Protein interactions for RNA: ENST00000490499.5

BPIFA3-204, Transcript of BPI fold containing family A member 3, humanhuman

TSL 1 (best)

Gene BPIFA3, Length 2,443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3-204ENST00000490499 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
BPIFA3-204ENST00000490499 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
BPIFA3-204ENST00000490499 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
BPIFA3-204ENST00000490499 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
BPIFA3-204ENST00000490499 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
BPIFA3-204ENST00000490499 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
BPIFA3-204ENST00000490499 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
BPIFA3-204ENST00000490499 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.14
BPIFA3-204ENST00000490499 ABCC9O60706 1549 aa14.03□□□□□ -0.16
BPIFA3-204ENST00000490499 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
BPIFA3-204ENST00000490499 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
BPIFA3-204ENST00000490499 NACADO15069 1562 aa13.82□□□□□ -0.2
BPIFA3-204ENST00000490499 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
BPIFA3-204ENST00000490499 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
BPIFA3-204ENST00000490499 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
BPIFA3-204ENST00000490499 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.23
BPIFA3-204ENST00000490499 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
BPIFA3-204ENST00000490499 UNC13AQ9UPW8 1703 aa13.62□□□□□ -0.23
BPIFA3-204ENST00000490499 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
BPIFA3-204ENST00000490499 WIZO95785 1651 aa13.52□□□□□ -0.25
BPIFA3-204ENST00000490499 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
BPIFA3-204ENST00000490499 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
BPIFA3-204ENST00000490499 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
BPIFA3-204ENST00000490499 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
BPIFA3-204ENST00000490499 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
BPIFA3-204ENST00000490499 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
BPIFA3-204ENST00000490499 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
BPIFA3-204ENST00000490499 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
BPIFA3-204ENST00000490499 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
BPIFA3-204ENST00000490499 TRIM41Q8WV44 630 aa13.21□□□□□ -0.3
BPIFA3-204ENST00000490499 SMARCA2P51531 1590 aa13.21□□□□□ -0.3
BPIFA3-204ENST00000490499 PCGF6Q9BYE7 350 aa13.19□□□□□ -0.3
BPIFA3-204ENST00000490499 CCDC88BA6NC98 1476 aa13.18□□□□□ -0.3
BPIFA3-204ENST00000490499 HRCP23327 699 aa13.16□□□□□ -0.3
BPIFA3-204ENST00000490499 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
BPIFA3-204ENST00000490499 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
BPIFA3-204ENST00000490499 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
BPIFA3-204ENST00000490499 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
BPIFA3-204ENST00000490499 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
BPIFA3-204ENST00000490499 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
BPIFA3-204ENST00000490499 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
BPIFA3-204ENST00000490499 TRIM26Q12899 539 aaPredicted RBP12.94□□□□□ -0.34
BPIFA3-204ENST00000490499 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
BPIFA3-204ENST00000490499 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
BPIFA3-204ENST00000490499 SOGA1O94964 1423 aa12.91□□□□□ -0.34
BPIFA3-204ENST00000490499 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
BPIFA3-204ENST00000490499 WRNQ14191 1432 aaPredicted RBP eCLIP12.83□□□□□ -0.36
BPIFA3-204ENST00000490499 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
BPIFA3-204ENST00000490499 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
BPIFA3-204ENST00000490499 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.38
BPIFA3-204ENST00000490499 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.38
BPIFA3-204ENST00000490499 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
BPIFA3-204ENST00000490499 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
BPIFA3-204ENST00000490499 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
BPIFA3-204ENST00000490499 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
BPIFA3-204ENST00000490499 EEA1Q15075 1411 aa12.67□□□□□ -0.38
BPIFA3-204ENST00000490499 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
BPIFA3-204ENST00000490499 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
BPIFA3-204ENST00000490499 CUX1P39880 1505 aa12.66□□□□□ -0.38
BPIFA3-204ENST00000490499 CFTRP13569 1480 aa12.63□□□□□ -0.39
BPIFA3-204ENST00000490499 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
BPIFA3-204ENST00000490499 KIF21BO75037 1637 aa12.63□□□□□ -0.39
BPIFA3-204ENST00000490499 ZEB1P37275 1124 aaPredicted RBP12.61□□□□□ -0.39
BPIFA3-204ENST00000490499 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
BPIFA3-204ENST00000490499 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
BPIFA3-204ENST00000490499 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
BPIFA3-204ENST00000490499 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
BPIFA3-204ENST00000490499 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
BPIFA3-204ENST00000490499 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
BPIFA3-204ENST00000490499 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
BPIFA3-204ENST00000490499 NESP48681 1621 aa12.48□□□□□ -0.41
BPIFA3-204ENST00000490499 CLIP1P30622 1438 aa12.48□□□□□ -0.41
BPIFA3-204ENST00000490499 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
BPIFA3-204ENST00000490499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
BPIFA3-204ENST00000490499 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
BPIFA3-204ENST00000490499 KCNA4P22459 653 aa12.43□□□□□ -0.42
BPIFA3-204ENST00000490499 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
BPIFA3-204ENST00000490499 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
BPIFA3-204ENST00000490499 KIF27Q86VH2 1401 aa12.41□□□□□ -0.42
BPIFA3-204ENST00000490499 CUX2O14529 1486 aa12.4□□□□□ -0.42
BPIFA3-204ENST00000490499 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
BPIFA3-204ENST00000490499 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
BPIFA3-204ENST00000490499 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
BPIFA3-204ENST00000490499 IGF1RP08069 1367 aa12.36□□□□□ -0.43
BPIFA3-204ENST00000490499 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
BPIFA3-204ENST00000490499 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
BPIFA3-204ENST00000490499 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
BPIFA3-204ENST00000490499 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
BPIFA3-204ENST00000490499 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
BPIFA3-204ENST00000490499 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
BPIFA3-204ENST00000490499 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
BPIFA3-204ENST00000490499 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
BPIFA3-204ENST00000490499 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
BPIFA3-204ENST00000490499 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.45
BPIFA3-204ENST00000490499 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
BPIFA3-204ENST00000490499 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
BPIFA3-204ENST00000490499 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
BPIFA3-204ENST00000490499 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
BPIFA3-204ENST00000490499 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
BPIFA3-204ENST00000490499 APLP2Q06481 763 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms