RNA–Protein interactions for RNA: ENST00000490251.1

COA1-219, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 2,135 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-219ENST00000490251 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
COA1-219ENST00000490251 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
COA1-219ENST00000490251 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
COA1-219ENST00000490251 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
COA1-219ENST00000490251 ABCC9O60706 1549 aa16.31■□□□□ 0.2
COA1-219ENST00000490251 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
COA1-219ENST00000490251 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
COA1-219ENST00000490251 NACADO15069 1562 aa15.87■□□□□ 0.13
COA1-219ENST00000490251 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
COA1-219ENST00000490251 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
COA1-219ENST00000490251 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.12
COA1-219ENST00000490251 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
COA1-219ENST00000490251 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
COA1-219ENST00000490251 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
COA1-219ENST00000490251 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
COA1-219ENST00000490251 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
COA1-219ENST00000490251 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
COA1-219ENST00000490251 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
COA1-219ENST00000490251 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
COA1-219ENST00000490251 WIZO95785 1651 aa15.06■□□□□ 0
COA1-219ENST00000490251 SMARCA4P51532 1647 aa15.04■□□□□ -0
COA1-219ENST00000490251 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
COA1-219ENST00000490251 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
COA1-219ENST00000490251 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
COA1-219ENST00000490251 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
COA1-219ENST00000490251 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
COA1-219ENST00000490251 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
COA1-219ENST00000490251 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
COA1-219ENST00000490251 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
COA1-219ENST00000490251 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
COA1-219ENST00000490251 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
COA1-219ENST00000490251 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
COA1-219ENST00000490251 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
COA1-219ENST00000490251 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
COA1-219ENST00000490251 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
COA1-219ENST00000490251 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
COA1-219ENST00000490251 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
COA1-219ENST00000490251 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
COA1-219ENST00000490251 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
COA1-219ENST00000490251 CFTRP13569 1480 aa14.37□□□□□ -0.11
COA1-219ENST00000490251 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
COA1-219ENST00000490251 NESP48681 1621 aa14.3□□□□□ -0.12
COA1-219ENST00000490251 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
COA1-219ENST00000490251 SOGA1O94964 1423 aa14.23□□□□□ -0.13
COA1-219ENST00000490251 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
COA1-219ENST00000490251 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
COA1-219ENST00000490251 CUX1P39880 1505 aa14.17□□□□□ -0.14
COA1-219ENST00000490251 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
COA1-219ENST00000490251 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
COA1-219ENST00000490251 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
COA1-219ENST00000490251 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
COA1-219ENST00000490251 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
COA1-219ENST00000490251 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
COA1-219ENST00000490251 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
COA1-219ENST00000490251 EEA1Q15075 1411 aa14.06□□□□□ -0.16
COA1-219ENST00000490251 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
COA1-219ENST00000490251 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
COA1-219ENST00000490251 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
COA1-219ENST00000490251 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
COA1-219ENST00000490251 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.17
COA1-219ENST00000490251 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
COA1-219ENST00000490251 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
COA1-219ENST00000490251 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
COA1-219ENST00000490251 CUX2O14529 1486 aa13.99□□□□□ -0.17
COA1-219ENST00000490251 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
COA1-219ENST00000490251 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
COA1-219ENST00000490251 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
COA1-219ENST00000490251 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
COA1-219ENST00000490251 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
COA1-219ENST00000490251 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
COA1-219ENST00000490251 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
COA1-219ENST00000490251 IGF1RP08069 1367 aa13.9□□□□□ -0.18
COA1-219ENST00000490251 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
COA1-219ENST00000490251 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
COA1-219ENST00000490251 KIF21BO75037 1637 aa13.86□□□□□ -0.19
COA1-219ENST00000490251 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
COA1-219ENST00000490251 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
COA1-219ENST00000490251 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
COA1-219ENST00000490251 WDR62O43379 1518 aa13.8□□□□□ -0.2
COA1-219ENST00000490251 PPARGC1BQ86YN6 1023 aaKnown RBP13.8□□□□□ -0.2
COA1-219ENST00000490251 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
COA1-219ENST00000490251 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■□□□□ 10.5
COA1-219ENST00000490251 GAPVD1Q14C86 1478 aa13.79□□□□□ -0.2
COA1-219ENST00000490251 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
COA1-219ENST00000490251 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
COA1-219ENST00000490251 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
COA1-219ENST00000490251 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
COA1-219ENST00000490251 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
COA1-219ENST00000490251 CLIP1P30622 1438 aa13.74□□□□□ -0.21
COA1-219ENST00000490251 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
COA1-219ENST00000490251 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
COA1-219ENST00000490251 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.22
COA1-219ENST00000490251 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
COA1-219ENST00000490251 FBLN2P98095 1184 aa13.66□□□□□ -0.22
COA1-219ENST00000490251 CUL7Q14999 1698 aa13.66□□□□□ -0.22
COA1-219ENST00000490251 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
COA1-219ENST00000490251 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
COA1-219ENST00000490251 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
COA1-219ENST00000490251 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
COA1-219ENST00000490251 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms