RNA–Protein interactions for RNA: ENST00000490242.2

ITGBL1-204, Transcript of integrin subunit beta like 1, humanhuman

TSL 2

Gene ITGBL1, Length 1,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGBL1-204ENST00000490242 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
ITGBL1-204ENST00000490242 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
ITGBL1-204ENST00000490242 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
ITGBL1-204ENST00000490242 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
ITGBL1-204ENST00000490242 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
ITGBL1-204ENST00000490242 ABCC9O60706 1549 aa25.05■■□□□ 1.6
ITGBL1-204ENST00000490242 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
ITGBL1-204ENST00000490242 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
ITGBL1-204ENST00000490242 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
ITGBL1-204ENST00000490242 NACADO15069 1562 aa24.62■■□□□ 1.53
ITGBL1-204ENST00000490242 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
ITGBL1-204ENST00000490242 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.5
ITGBL1-204ENST00000490242 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
ITGBL1-204ENST00000490242 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
ITGBL1-204ENST00000490242 SCRIBQ14160 1630 aa24.07■■□□□ 1.44
ITGBL1-204ENST00000490242 UNC13AQ9UPW8 1703 aa23.84■■□□□ 1.41
ITGBL1-204ENST00000490242 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
ITGBL1-204ENST00000490242 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
ITGBL1-204ENST00000490242 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
ITGBL1-204ENST00000490242 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
ITGBL1-204ENST00000490242 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
ITGBL1-204ENST00000490242 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
ITGBL1-204ENST00000490242 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
ITGBL1-204ENST00000490242 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
ITGBL1-204ENST00000490242 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
ITGBL1-204ENST00000490242 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
ITGBL1-204ENST00000490242 WIZO95785 1651 aa22.91■■□□□ 1.26
ITGBL1-204ENST00000490242 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
ITGBL1-204ENST00000490242 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
ITGBL1-204ENST00000490242 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
ITGBL1-204ENST00000490242 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
ITGBL1-204ENST00000490242 FOXD1Q16676 465 aa22.73■■□□□ 1.23
ITGBL1-204ENST00000490242 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
ITGBL1-204ENST00000490242 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
ITGBL1-204ENST00000490242 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
ITGBL1-204ENST00000490242 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
ITGBL1-204ENST00000490242 CCDC88BA6NC98 1476 aa22.48■■□□□ 1.19
ITGBL1-204ENST00000490242 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
ITGBL1-204ENST00000490242 CFTRP13569 1480 aa22.13■■□□□ 1.13
ITGBL1-204ENST00000490242 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
ITGBL1-204ENST00000490242 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
ITGBL1-204ENST00000490242 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
ITGBL1-204ENST00000490242 NESP48681 1621 aa21.91■■□□□ 1.1
ITGBL1-204ENST00000490242 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
ITGBL1-204ENST00000490242 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
ITGBL1-204ENST00000490242 TRIM41Q8WV44 630 aa21.83■■□□□ 1.08
ITGBL1-204ENST00000490242 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
ITGBL1-204ENST00000490242 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
ITGBL1-204ENST00000490242 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
ITGBL1-204ENST00000490242 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
ITGBL1-204ENST00000490242 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
ITGBL1-204ENST00000490242 CUX1P39880 1505 aa21.67■■□□□ 1.06
ITGBL1-204ENST00000490242 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
ITGBL1-204ENST00000490242 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
ITGBL1-204ENST00000490242 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
ITGBL1-204ENST00000490242 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
ITGBL1-204ENST00000490242 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
ITGBL1-204ENST00000490242 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
ITGBL1-204ENST00000490242 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
ITGBL1-204ENST00000490242 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
ITGBL1-204ENST00000490242 WDR62O43379 1518 aa21.44■■□□□ 1.02
ITGBL1-204ENST00000490242 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
ITGBL1-204ENST00000490242 EEA1Q15075 1411 aa21.43■■□□□ 1.02
ITGBL1-204ENST00000490242 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
ITGBL1-204ENST00000490242 SOGA1O94964 1423 aa21.42■■□□□ 1.02
ITGBL1-204ENST00000490242 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
ITGBL1-204ENST00000490242 ADRA2BP18089 450 aa21.4■■□□□ 1.02
ITGBL1-204ENST00000490242 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1.01
ITGBL1-204ENST00000490242 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1.01
ITGBL1-204ENST00000490242 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
ITGBL1-204ENST00000490242 KIF27Q86VH2 1401 aa21.32■■□□□ 1
ITGBL1-204ENST00000490242 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
ITGBL1-204ENST00000490242 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
ITGBL1-204ENST00000490242 CUX2O14529 1486 aa21.29■■□□□ 1
ITGBL1-204ENST00000490242 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
ITGBL1-204ENST00000490242 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
ITGBL1-204ENST00000490242 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
ITGBL1-204ENST00000490242 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
ITGBL1-204ENST00000490242 MSH5O43196 834 aa21.16■□□□□ 0.98
ITGBL1-204ENST00000490242 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
ITGBL1-204ENST00000490242 IGF1RP08069 1367 aa21.15■□□□□ 0.98
ITGBL1-204ENST00000490242 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
ITGBL1-204ENST00000490242 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.98
ITGBL1-204ENST00000490242 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
ITGBL1-204ENST00000490242 KIF21BO75037 1637 aa21.12■□□□□ 0.97
ITGBL1-204ENST00000490242 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
ITGBL1-204ENST00000490242 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
ITGBL1-204ENST00000490242 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
ITGBL1-204ENST00000490242 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
ITGBL1-204ENST00000490242 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.96
ITGBL1-204ENST00000490242 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
ITGBL1-204ENST00000490242 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
ITGBL1-204ENST00000490242 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
ITGBL1-204ENST00000490242 CUL7Q14999 1698 aa21.01■□□□□ 0.95
ITGBL1-204ENST00000490242 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
ITGBL1-204ENST00000490242 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
ITGBL1-204ENST00000490242 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
ITGBL1-204ENST00000490242 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
ITGBL1-204ENST00000490242 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
ITGBL1-204ENST00000490242 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms