RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
UBP1-211ENST00000490112 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
UBP1-211ENST00000490112 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
UBP1-211ENST00000490112 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
UBP1-211ENST00000490112 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
UBP1-211ENST00000490112 FOXD1Q16676 465 aa24.28■■□□□ 1.48
UBP1-211ENST00000490112 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
UBP1-211ENST00000490112 ABCC9O60706 1549 aa24.03■■□□□ 1.44
UBP1-211ENST00000490112 POTEDQ86YR6 584 aa23.03■■□□□ 1.28
UBP1-211ENST00000490112 MSH5O43196 834 aa22.95■■□□□ 1.26
UBP1-211ENST00000490112 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
UBP1-211ENST00000490112 NACADO15069 1562 aa22.77■■□□□ 1.24
UBP1-211ENST00000490112 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
UBP1-211ENST00000490112 PIAS4Q8N2W9 510 aaPredicted RBP22.6■■□□□ 1.21
UBP1-211ENST00000490112 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
UBP1-211ENST00000490112 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
UBP1-211ENST00000490112 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
UBP1-211ENST00000490112 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
UBP1-211ENST00000490112 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
UBP1-211ENST00000490112 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
UBP1-211ENST00000490112 ADRA2BP18089 450 aa22.26■■□□□ 1.15
UBP1-211ENST00000490112 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
UBP1-211ENST00000490112 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
UBP1-211ENST00000490112 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
UBP1-211ENST00000490112 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
UBP1-211ENST00000490112 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
UBP1-211ENST00000490112 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
UBP1-211ENST00000490112 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
UBP1-211ENST00000490112 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
UBP1-211ENST00000490112 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
UBP1-211ENST00000490112 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
UBP1-211ENST00000490112 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
UBP1-211ENST00000490112 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
UBP1-211ENST00000490112 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
UBP1-211ENST00000490112 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
UBP1-211ENST00000490112 CUX2O14529 1486 aa20.81■□□□□ 0.92
UBP1-211ENST00000490112 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
UBP1-211ENST00000490112 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
UBP1-211ENST00000490112 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
UBP1-211ENST00000490112 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
UBP1-211ENST00000490112 NESP48681 1621 aa20.6■□□□□ 0.89
UBP1-211ENST00000490112 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
UBP1-211ENST00000490112 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
UBP1-211ENST00000490112 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
UBP1-211ENST00000490112 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
UBP1-211ENST00000490112 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
UBP1-211ENST00000490112 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
UBP1-211ENST00000490112 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
UBP1-211ENST00000490112 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
UBP1-211ENST00000490112 KIF21AQ7Z4S6 1674 aa20.36■□□□□ 0.85
UBP1-211ENST00000490112 WIZO95785 1651 aa20.31■□□□□ 0.84
UBP1-211ENST00000490112 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
UBP1-211ENST00000490112 WDR62O43379 1518 aa20.17■□□□□ 0.82
UBP1-211ENST00000490112 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
UBP1-211ENST00000490112 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
UBP1-211ENST00000490112 CFTRP13569 1480 aa20.11■□□□□ 0.81
UBP1-211ENST00000490112 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
UBP1-211ENST00000490112 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
UBP1-211ENST00000490112 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
UBP1-211ENST00000490112 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
UBP1-211ENST00000490112 CACNB1Q02641 598 aaPredicted RBP19.9■□□□□ 0.78
UBP1-211ENST00000490112 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
UBP1-211ENST00000490112 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
UBP1-211ENST00000490112 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
UBP1-211ENST00000490112 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
UBP1-211ENST00000490112 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
UBP1-211ENST00000490112 PPP4R3CPQ6ZMV5 832 aa19.74■□□□□ 0.75
UBP1-211ENST00000490112 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
UBP1-211ENST00000490112 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
UBP1-211ENST00000490112 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
UBP1-211ENST00000490112 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
UBP1-211ENST00000490112 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
UBP1-211ENST00000490112 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
UBP1-211ENST00000490112 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
UBP1-211ENST00000490112 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
UBP1-211ENST00000490112 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
UBP1-211ENST00000490112 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
UBP1-211ENST00000490112 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
UBP1-211ENST00000490112 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
UBP1-211ENST00000490112 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
UBP1-211ENST00000490112 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
UBP1-211ENST00000490112 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
UBP1-211ENST00000490112 SOGA1O94964 1423 aa19.44■□□□□ 0.7
UBP1-211ENST00000490112 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
UBP1-211ENST00000490112 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
UBP1-211ENST00000490112 CHD1O14646 1710 aa19.42■□□□□ 0.7
UBP1-211ENST00000490112 FBLN2P98095 1184 aa19.42■□□□□ 0.7
UBP1-211ENST00000490112 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
UBP1-211ENST00000490112 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
UBP1-211ENST00000490112 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
UBP1-211ENST00000490112 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
UBP1-211ENST00000490112 CUX1P39880 1505 aa19.33■□□□□ 0.68
UBP1-211ENST00000490112 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
UBP1-211ENST00000490112 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
UBP1-211ENST00000490112 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
UBP1-211ENST00000490112 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
UBP1-211ENST00000490112 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
UBP1-211ENST00000490112 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
UBP1-211ENST00000490112 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
UBP1-211ENST00000490112 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms