RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 NISCHQ9Y2I1 1504 aa39.95■■■■□ 3.99
SFXN5-220ENST00000490056 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
SFXN5-220ENST00000490056 ABCC9O60706 1549 aa34.3■■■■□ 3.08
SFXN5-220ENST00000490056 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
SFXN5-220ENST00000490056 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
SFXN5-220ENST00000490056 NACADO15069 1562 aa33.1■■■□□ 2.89
SFXN5-220ENST00000490056 RB1CC1Q8TDY2 1594 aa33.06■■■□□ 2.88
SFXN5-220ENST00000490056 DCAF1Q9Y4B6 1507 aa33■■■□□ 2.87
SFXN5-220ENST00000490056 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
SFXN5-220ENST00000490056 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
SFXN5-220ENST00000490056 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
SFXN5-220ENST00000490056 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
SFXN5-220ENST00000490056 BICRAQ9NZM4 1560 aa32.1■■■□□ 2.73
SFXN5-220ENST00000490056 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
SFXN5-220ENST00000490056 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
SFXN5-220ENST00000490056 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
SFXN5-220ENST00000490056 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
SFXN5-220ENST00000490056 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
SFXN5-220ENST00000490056 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
SFXN5-220ENST00000490056 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
SFXN5-220ENST00000490056 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
SFXN5-220ENST00000490056 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
SFXN5-220ENST00000490056 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
SFXN5-220ENST00000490056 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
SFXN5-220ENST00000490056 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
SFXN5-220ENST00000490056 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
SFXN5-220ENST00000490056 WIZO95785 1651 aa30.53■■■□□ 2.48
SFXN5-220ENST00000490056 BAZ1BQ9UIG0 1483 aaKnown RBP30.43■■■□□ 2.46
SFXN5-220ENST00000490056 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
SFXN5-220ENST00000490056 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
SFXN5-220ENST00000490056 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
SFXN5-220ENST00000490056 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
SFXN5-220ENST00000490056 NESP48681 1621 aa29.8■■■□□ 2.36
SFXN5-220ENST00000490056 CADPSQ9ULU8 1353 aa29.72■■■□□ 2.35
SFXN5-220ENST00000490056 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
SFXN5-220ENST00000490056 CFTRP13569 1480 aa29.61■■■□□ 2.33
SFXN5-220ENST00000490056 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
SFXN5-220ENST00000490056 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
SFXN5-220ENST00000490056 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
SFXN5-220ENST00000490056 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
SFXN5-220ENST00000490056 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
SFXN5-220ENST00000490056 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
SFXN5-220ENST00000490056 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
SFXN5-220ENST00000490056 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
SFXN5-220ENST00000490056 URB2Q14146 1524 aaKnown RBP29.09■■■□□ 2.25
SFXN5-220ENST00000490056 WDR62O43379 1518 aa29.04■■■□□ 2.24
SFXN5-220ENST00000490056 CUX2O14529 1486 aa28.99■■■□□ 2.23
SFXN5-220ENST00000490056 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
SFXN5-220ENST00000490056 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
SFXN5-220ENST00000490056 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
SFXN5-220ENST00000490056 CUX1P39880 1505 aa28.89■■■□□ 2.22
SFXN5-220ENST00000490056 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.211e-6■■■■■ 58.5
SFXN5-220ENST00000490056 SYNJ1O43426 1573 aa28.76■■■□□ 2.19
SFXN5-220ENST00000490056 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
SFXN5-220ENST00000490056 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
SFXN5-220ENST00000490056 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
SFXN5-220ENST00000490056 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
SFXN5-220ENST00000490056 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
SFXN5-220ENST00000490056 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
SFXN5-220ENST00000490056 SOGA1O94964 1423 aa28.64■■■□□ 2.18
SFXN5-220ENST00000490056 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
SFXN5-220ENST00000490056 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
SFXN5-220ENST00000490056 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
SFXN5-220ENST00000490056 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
SFXN5-220ENST00000490056 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
SFXN5-220ENST00000490056 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
SFXN5-220ENST00000490056 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
SFXN5-220ENST00000490056 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
SFXN5-220ENST00000490056 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
SFXN5-220ENST00000490056 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
SFXN5-220ENST00000490056 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
SFXN5-220ENST00000490056 GRIN2BQ13224 1484 aa28.23■■■□□ 2.11
SFXN5-220ENST00000490056 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
SFXN5-220ENST00000490056 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
SFXN5-220ENST00000490056 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
SFXN5-220ENST00000490056 RUSC2Q8N2Y8 1516 aa28.14■■■□□ 2.1
SFXN5-220ENST00000490056 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
SFXN5-220ENST00000490056 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
SFXN5-220ENST00000490056 FBLN2P98095 1184 aa28.07■■■□□ 2.08
SFXN5-220ENST00000490056 IGF1RP08069 1367 aa28.07■■■□□ 2.08
SFXN5-220ENST00000490056 CHMP7Q8WUX9 453 aaPredicted RBP28.01■■■□□ 2.07
SFXN5-220ENST00000490056 CHD1O14646 1710 aa28.01■■■□□ 2.07
SFXN5-220ENST00000490056 SYNJ2O15056 1496 aa28■■■□□ 2.07
SFXN5-220ENST00000490056 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
SFXN5-220ENST00000490056 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
SFXN5-220ENST00000490056 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
SFXN5-220ENST00000490056 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
SFXN5-220ENST00000490056 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
SFXN5-220ENST00000490056 CUL7Q14999 1698 aa27.9■■■□□ 2.06
SFXN5-220ENST00000490056 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
SFXN5-220ENST00000490056 EEA1Q15075 1411 aa27.86■■■□□ 2.05
SFXN5-220ENST00000490056 CSRNP3Q8WYN3 585 aa27.86■■■□□ 2.05
SFXN5-220ENST00000490056 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
SFXN5-220ENST00000490056 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
SFXN5-220ENST00000490056 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
SFXN5-220ENST00000490056 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
SFXN5-220ENST00000490056 NUP160Q12769 1436 aa27.73■■■□□ 2.03
SFXN5-220ENST00000490056 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
SFXN5-220ENST00000490056 EHMT2Q96KQ7 1210 aa27.6■■■□□ 2.01
SFXN5-220ENST00000490056 KIF21BO75037 1637 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms