RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
COMMD2-206ENST00000490008 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
COMMD2-206ENST00000490008 ABCC9O60706 1549 aa29.04■■■□□ 2.24
COMMD2-206ENST00000490008 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
COMMD2-206ENST00000490008 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
COMMD2-206ENST00000490008 NACADO15069 1562 aa27.99■■■□□ 2.07
COMMD2-206ENST00000490008 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
COMMD2-206ENST00000490008 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
COMMD2-206ENST00000490008 DCAF1Q9Y4B6 1507 aa27.86■■■□□ 2.05
COMMD2-206ENST00000490008 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
COMMD2-206ENST00000490008 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
COMMD2-206ENST00000490008 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
COMMD2-206ENST00000490008 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
COMMD2-206ENST00000490008 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
COMMD2-206ENST00000490008 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
COMMD2-206ENST00000490008 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
COMMD2-206ENST00000490008 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
COMMD2-206ENST00000490008 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
COMMD2-206ENST00000490008 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
COMMD2-206ENST00000490008 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
COMMD2-206ENST00000490008 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
COMMD2-206ENST00000490008 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
COMMD2-206ENST00000490008 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
COMMD2-206ENST00000490008 SMARCA2P51531 1590 aa25.89■■□□□ 1.73
COMMD2-206ENST00000490008 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
COMMD2-206ENST00000490008 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
COMMD2-206ENST00000490008 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
COMMD2-206ENST00000490008 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
COMMD2-206ENST00000490008 WIZO95785 1651 aa25.68■■□□□ 1.7
COMMD2-206ENST00000490008 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
COMMD2-206ENST00000490008 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
COMMD2-206ENST00000490008 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
COMMD2-206ENST00000490008 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
COMMD2-206ENST00000490008 NESP48681 1621 aa25.16■■□□□ 1.62
COMMD2-206ENST00000490008 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
COMMD2-206ENST00000490008 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
COMMD2-206ENST00000490008 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
COMMD2-206ENST00000490008 CFTRP13569 1480 aa25.04■■□□□ 1.6
COMMD2-206ENST00000490008 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
COMMD2-206ENST00000490008 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
COMMD2-206ENST00000490008 KIF21AQ7Z4S6 1674 aa24.71■■□□□ 1.55
COMMD2-206ENST00000490008 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
COMMD2-206ENST00000490008 CUX2O14529 1486 aa24.59■■□□□ 1.53
COMMD2-206ENST00000490008 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
COMMD2-206ENST00000490008 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
COMMD2-206ENST00000490008 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
COMMD2-206ENST00000490008 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
COMMD2-206ENST00000490008 WDR62O43379 1518 aa24.51■■□□□ 1.51
COMMD2-206ENST00000490008 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
COMMD2-206ENST00000490008 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
COMMD2-206ENST00000490008 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
COMMD2-206ENST00000490008 CUX1P39880 1505 aa24.35■■□□□ 1.49
COMMD2-206ENST00000490008 SOGA1O94964 1423 aa24.32■■□□□ 1.48
COMMD2-206ENST00000490008 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
COMMD2-206ENST00000490008 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
COMMD2-206ENST00000490008 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
COMMD2-206ENST00000490008 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
COMMD2-206ENST00000490008 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
COMMD2-206ENST00000490008 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
COMMD2-206ENST00000490008 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
COMMD2-206ENST00000490008 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
COMMD2-206ENST00000490008 ZNF608Q9ULD9 1512 aaPredicted RBP24.12■■□□□ 1.45
COMMD2-206ENST00000490008 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.45
COMMD2-206ENST00000490008 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
COMMD2-206ENST00000490008 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
COMMD2-206ENST00000490008 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
COMMD2-206ENST00000490008 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
COMMD2-206ENST00000490008 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
COMMD2-206ENST00000490008 FBLN2P98095 1184 aa23.98■■□□□ 1.43
COMMD2-206ENST00000490008 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
COMMD2-206ENST00000490008 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
COMMD2-206ENST00000490008 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
COMMD2-206ENST00000490008 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
COMMD2-206ENST00000490008 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
COMMD2-206ENST00000490008 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
COMMD2-206ENST00000490008 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
COMMD2-206ENST00000490008 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
COMMD2-206ENST00000490008 IGF1RP08069 1367 aa23.8■■□□□ 1.4
COMMD2-206ENST00000490008 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
COMMD2-206ENST00000490008 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
COMMD2-206ENST00000490008 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
COMMD2-206ENST00000490008 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
COMMD2-206ENST00000490008 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
COMMD2-206ENST00000490008 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
COMMD2-206ENST00000490008 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
COMMD2-206ENST00000490008 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
COMMD2-206ENST00000490008 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
COMMD2-206ENST00000490008 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
COMMD2-206ENST00000490008 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
COMMD2-206ENST00000490008 EEA1Q15075 1411 aa23.62■■□□□ 1.37
COMMD2-206ENST00000490008 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
COMMD2-206ENST00000490008 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
COMMD2-206ENST00000490008 CHD1O14646 1710 aa23.53■■□□□ 1.36
COMMD2-206ENST00000490008 CUL7Q14999 1698 aa23.51■■□□□ 1.35
COMMD2-206ENST00000490008 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
COMMD2-206ENST00000490008 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
COMMD2-206ENST00000490008 NUP160Q12769 1436 aa23.44■■□□□ 1.34
COMMD2-206ENST00000490008 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
COMMD2-206ENST00000490008 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
COMMD2-206ENST00000490008 UBTFP17480 764 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms