RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 AEBP2Q6ZN18 517 aaPredicted RBP28.66■■■□□ 2.18
NUP98-212ENST00000488828 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
NUP98-212ENST00000488828 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
NUP98-212ENST00000488828 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
NUP98-212ENST00000488828 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
NUP98-212ENST00000488828 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
NUP98-212ENST00000488828 ABCC9O60706 1549 aa22.98■■□□□ 1.27
NUP98-212ENST00000488828 FOXD1Q16676 465 aa22.61■■□□□ 1.21
NUP98-212ENST00000488828 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
NUP98-212ENST00000488828 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
NUP98-212ENST00000488828 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
NUP98-212ENST00000488828 NACADO15069 1562 aa21.99■■□□□ 1.11
NUP98-212ENST00000488828 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
NUP98-212ENST00000488828 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
NUP98-212ENST00000488828 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
NUP98-212ENST00000488828 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
NUP98-212ENST00000488828 ADRA2BP18089 450 aa21.61■■□□□ 1.05
NUP98-212ENST00000488828 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
NUP98-212ENST00000488828 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
NUP98-212ENST00000488828 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
NUP98-212ENST00000488828 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
NUP98-212ENST00000488828 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
NUP98-212ENST00000488828 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
NUP98-212ENST00000488828 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
NUP98-212ENST00000488828 MSH5O43196 834 aa20.9■□□□□ 0.94
NUP98-212ENST00000488828 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
NUP98-212ENST00000488828 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
NUP98-212ENST00000488828 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
NUP98-212ENST00000488828 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
NUP98-212ENST00000488828 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
NUP98-212ENST00000488828 ATAD2BQ9ULI0 1458 aa20.33■□□□□ 0.85
NUP98-212ENST00000488828 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
NUP98-212ENST00000488828 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
NUP98-212ENST00000488828 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
NUP98-212ENST00000488828 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
NUP98-212ENST00000488828 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
NUP98-212ENST00000488828 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
NUP98-212ENST00000488828 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
NUP98-212ENST00000488828 WIZO95785 1651 aa20.1■□□□□ 0.81
NUP98-212ENST00000488828 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
NUP98-212ENST00000488828 NESP48681 1621 aa19.86■□□□□ 0.77
NUP98-212ENST00000488828 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
NUP98-212ENST00000488828 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
NUP98-212ENST00000488828 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
NUP98-212ENST00000488828 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
NUP98-212ENST00000488828 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
NUP98-212ENST00000488828 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
NUP98-212ENST00000488828 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
NUP98-212ENST00000488828 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
NUP98-212ENST00000488828 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
NUP98-212ENST00000488828 CFTRP13569 1480 aa19.6■□□□□ 0.73
NUP98-212ENST00000488828 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
NUP98-212ENST00000488828 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
NUP98-212ENST00000488828 CUX2O14529 1486 aa19.5■□□□□ 0.71
NUP98-212ENST00000488828 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
NUP98-212ENST00000488828 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
NUP98-212ENST00000488828 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
NUP98-212ENST00000488828 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
NUP98-212ENST00000488828 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
NUP98-212ENST00000488828 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
NUP98-212ENST00000488828 WDR62O43379 1518 aa19.32■□□□□ 0.68
NUP98-212ENST00000488828 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
NUP98-212ENST00000488828 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
NUP98-212ENST00000488828 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
NUP98-212ENST00000488828 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
NUP98-212ENST00000488828 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
NUP98-212ENST00000488828 KCNA4P22459 653 aa19.18■□□□□ 0.66
NUP98-212ENST00000488828 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
NUP98-212ENST00000488828 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
NUP98-212ENST00000488828 SOGA1O94964 1423 aa19.05■□□□□ 0.64
NUP98-212ENST00000488828 CUX1P39880 1505 aa19.05■□□□□ 0.64
NUP98-212ENST00000488828 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
NUP98-212ENST00000488828 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.63
NUP98-212ENST00000488828 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
NUP98-212ENST00000488828 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
NUP98-212ENST00000488828 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
NUP98-212ENST00000488828 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
NUP98-212ENST00000488828 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
NUP98-212ENST00000488828 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
NUP98-212ENST00000488828 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
NUP98-212ENST00000488828 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
NUP98-212ENST00000488828 TARBP1Q13395 1621 aaKnown RBP18.93■□□□□ 0.62
NUP98-212ENST00000488828 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
NUP98-212ENST00000488828 FBLN2P98095 1184 aa18.89■□□□□ 0.61
NUP98-212ENST00000488828 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
NUP98-212ENST00000488828 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
NUP98-212ENST00000488828 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
NUP98-212ENST00000488828 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
NUP98-212ENST00000488828 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.61
NUP98-212ENST00000488828 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
NUP98-212ENST00000488828 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
NUP98-212ENST00000488828 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
NUP98-212ENST00000488828 GRIN2BQ13224 1484 aa18.77■□□□□ 0.59
NUP98-212ENST00000488828 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
NUP98-212ENST00000488828 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
NUP98-212ENST00000488828 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
NUP98-212ENST00000488828 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
NUP98-212ENST00000488828 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
NUP98-212ENST00000488828 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
NUP98-212ENST00000488828 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms