RNA–Protein interactions for RNA: ENST00000488655.5

LRMDA-204, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2

Gene LRMDA, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-204ENST00000488655 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
LRMDA-204ENST00000488655 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
LRMDA-204ENST00000488655 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
LRMDA-204ENST00000488655 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
LRMDA-204ENST00000488655 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
LRMDA-204ENST00000488655 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
LRMDA-204ENST00000488655 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
LRMDA-204ENST00000488655 ABCC9O60706 1549 aa15.78■□□□□ 0.12
LRMDA-204ENST00000488655 FOXD1Q16676 465 aa15.58■□□□□ 0.08
LRMDA-204ENST00000488655 ADRA2BP18089 450 aa15.42■□□□□ 0.06
LRMDA-204ENST00000488655 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
LRMDA-204ENST00000488655 NACADO15069 1562 aa15.33■□□□□ 0.05
LRMDA-204ENST00000488655 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
LRMDA-204ENST00000488655 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
LRMDA-204ENST00000488655 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
LRMDA-204ENST00000488655 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
LRMDA-204ENST00000488655 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
LRMDA-204ENST00000488655 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
LRMDA-204ENST00000488655 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
LRMDA-204ENST00000488655 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
LRMDA-204ENST00000488655 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
LRMDA-204ENST00000488655 KCNA4P22459 653 aa14.77□□□□□ -0.05
LRMDA-204ENST00000488655 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
LRMDA-204ENST00000488655 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
LRMDA-204ENST00000488655 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
LRMDA-204ENST00000488655 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
LRMDA-204ENST00000488655 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
LRMDA-204ENST00000488655 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
LRMDA-204ENST00000488655 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
LRMDA-204ENST00000488655 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
LRMDA-204ENST00000488655 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
LRMDA-204ENST00000488655 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
LRMDA-204ENST00000488655 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
LRMDA-204ENST00000488655 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
LRMDA-204ENST00000488655 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
LRMDA-204ENST00000488655 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
LRMDA-204ENST00000488655 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
LRMDA-204ENST00000488655 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
LRMDA-204ENST00000488655 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
LRMDA-204ENST00000488655 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
LRMDA-204ENST00000488655 MSH5O43196 834 aa14.1□□□□□ -0.15
LRMDA-204ENST00000488655 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
LRMDA-204ENST00000488655 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
LRMDA-204ENST00000488655 WIZO95785 1651 aa14.04□□□□□ -0.16
LRMDA-204ENST00000488655 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
LRMDA-204ENST00000488655 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
LRMDA-204ENST00000488655 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
LRMDA-204ENST00000488655 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
LRMDA-204ENST00000488655 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
LRMDA-204ENST00000488655 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
LRMDA-204ENST00000488655 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
LRMDA-204ENST00000488655 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
LRMDA-204ENST00000488655 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
LRMDA-204ENST00000488655 NESP48681 1621 aa13.72□□□□□ -0.21
LRMDA-204ENST00000488655 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
LRMDA-204ENST00000488655 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
LRMDA-204ENST00000488655 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
LRMDA-204ENST00000488655 CFTRP13569 1480 aa13.63□□□□□ -0.23
LRMDA-204ENST00000488655 ZBTB22O15209 634 aa13.62□□□□□ -0.23
LRMDA-204ENST00000488655 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
LRMDA-204ENST00000488655 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
LRMDA-204ENST00000488655 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
LRMDA-204ENST00000488655 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
LRMDA-204ENST00000488655 CUX2O14529 1486 aa13.5□□□□□ -0.25
LRMDA-204ENST00000488655 FANCD2Q9BXW9 1451 aa13.5□□□□□ -0.25
LRMDA-204ENST00000488655 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
LRMDA-204ENST00000488655 WDR62O43379 1518 aa13.49□□□□□ -0.25
LRMDA-204ENST00000488655 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
LRMDA-204ENST00000488655 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
LRMDA-204ENST00000488655 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
LRMDA-204ENST00000488655 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
LRMDA-204ENST00000488655 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
LRMDA-204ENST00000488655 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
LRMDA-204ENST00000488655 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
LRMDA-204ENST00000488655 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
LRMDA-204ENST00000488655 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
LRMDA-204ENST00000488655 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
LRMDA-204ENST00000488655 CUX1P39880 1505 aa13.26□□□□□ -0.29
LRMDA-204ENST00000488655 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
LRMDA-204ENST00000488655 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
LRMDA-204ENST00000488655 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
LRMDA-204ENST00000488655 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
LRMDA-204ENST00000488655 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
LRMDA-204ENST00000488655 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
LRMDA-204ENST00000488655 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
LRMDA-204ENST00000488655 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
LRMDA-204ENST00000488655 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
LRMDA-204ENST00000488655 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
LRMDA-204ENST00000488655 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
LRMDA-204ENST00000488655 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
LRMDA-204ENST00000488655 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
LRMDA-204ENST00000488655 SOGA1O94964 1423 aa13.1□□□□□ -0.31
LRMDA-204ENST00000488655 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
LRMDA-204ENST00000488655 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
LRMDA-204ENST00000488655 CHD1O14646 1710 aa13.05□□□□□ -0.32
LRMDA-204ENST00000488655 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRMDA-204ENST00000488655 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
LRMDA-204ENST00000488655 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
LRMDA-204ENST00000488655 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
LRMDA-204ENST00000488655 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms