RNA–Protein interactions for RNA: ENST00000488338.2

LAMTOR4-210, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, humanhuman

TSL 3

Gene LAMTOR4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR4-210ENST00000488338 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
LAMTOR4-210ENST00000488338 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
LAMTOR4-210ENST00000488338 ABCC9O60706 1549 aa30.21■■■□□ 2.43
LAMTOR4-210ENST00000488338 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
LAMTOR4-210ENST00000488338 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
LAMTOR4-210ENST00000488338 NACADO15069 1562 aa29.27■■■□□ 2.28
LAMTOR4-210ENST00000488338 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
LAMTOR4-210ENST00000488338 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.27
LAMTOR4-210ENST00000488338 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
LAMTOR4-210ENST00000488338 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
LAMTOR4-210ENST00000488338 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
LAMTOR4-210ENST00000488338 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
LAMTOR4-210ENST00000488338 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
LAMTOR4-210ENST00000488338 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
LAMTOR4-210ENST00000488338 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
LAMTOR4-210ENST00000488338 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
LAMTOR4-210ENST00000488338 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
LAMTOR4-210ENST00000488338 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
LAMTOR4-210ENST00000488338 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
LAMTOR4-210ENST00000488338 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
LAMTOR4-210ENST00000488338 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
LAMTOR4-210ENST00000488338 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
LAMTOR4-210ENST00000488338 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
LAMTOR4-210ENST00000488338 NCAPD3P42695 1498 aa27■■□□□ 1.91
LAMTOR4-210ENST00000488338 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
LAMTOR4-210ENST00000488338 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
LAMTOR4-210ENST00000488338 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
LAMTOR4-210ENST00000488338 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
LAMTOR4-210ENST00000488338 WIZO95785 1651 aa26.82■■□□□ 1.88
LAMTOR4-210ENST00000488338 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
LAMTOR4-210ENST00000488338 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
LAMTOR4-210ENST00000488338 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
LAMTOR4-210ENST00000488338 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
LAMTOR4-210ENST00000488338 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
LAMTOR4-210ENST00000488338 NESP48681 1621 aa26.19■■□□□ 1.78
LAMTOR4-210ENST00000488338 CFTRP13569 1480 aa26.12■■□□□ 1.77
LAMTOR4-210ENST00000488338 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
LAMTOR4-210ENST00000488338 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
LAMTOR4-210ENST00000488338 PRDM2Q13029 1718 aa25.93■■□□□ 1.74
LAMTOR4-210ENST00000488338 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
LAMTOR4-210ENST00000488338 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
LAMTOR4-210ENST00000488338 CEP164Q9UPV0 1460 aa25.88■■□□□ 1.73
LAMTOR4-210ENST00000488338 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
LAMTOR4-210ENST00000488338 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
LAMTOR4-210ENST00000488338 CUX2O14529 1486 aa25.7■■□□□ 1.7
LAMTOR4-210ENST00000488338 WDR62O43379 1518 aa25.65■■□□□ 1.7
LAMTOR4-210ENST00000488338 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
LAMTOR4-210ENST00000488338 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
LAMTOR4-210ENST00000488338 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
LAMTOR4-210ENST00000488338 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
LAMTOR4-210ENST00000488338 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
LAMTOR4-210ENST00000488338 CUX1P39880 1505 aa25.4■■□□□ 1.66
LAMTOR4-210ENST00000488338 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
LAMTOR4-210ENST00000488338 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
LAMTOR4-210ENST00000488338 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
LAMTOR4-210ENST00000488338 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
LAMTOR4-210ENST00000488338 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
LAMTOR4-210ENST00000488338 SOGA1O94964 1423 aa25.27■■□□□ 1.64
LAMTOR4-210ENST00000488338 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
LAMTOR4-210ENST00000488338 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
LAMTOR4-210ENST00000488338 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
LAMTOR4-210ENST00000488338 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
LAMTOR4-210ENST00000488338 WDR97A6NE52 1622 aa25.1■■□□□ 1.61
LAMTOR4-210ENST00000488338 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
LAMTOR4-210ENST00000488338 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
LAMTOR4-210ENST00000488338 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
LAMTOR4-210ENST00000488338 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
LAMTOR4-210ENST00000488338 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.63e-7■■■■■ 29.9
LAMTOR4-210ENST00000488338 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
LAMTOR4-210ENST00000488338 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
LAMTOR4-210ENST00000488338 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
LAMTOR4-210ENST00000488338 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
LAMTOR4-210ENST00000488338 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
LAMTOR4-210ENST00000488338 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
LAMTOR4-210ENST00000488338 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
LAMTOR4-210ENST00000488338 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.56
LAMTOR4-210ENST00000488338 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
LAMTOR4-210ENST00000488338 FBLN2P98095 1184 aa24.76■■□□□ 1.55
LAMTOR4-210ENST00000488338 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
LAMTOR4-210ENST00000488338 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
LAMTOR4-210ENST00000488338 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
LAMTOR4-210ENST00000488338 IGF1RP08069 1367 aa24.71■■□□□ 1.55
LAMTOR4-210ENST00000488338 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
LAMTOR4-210ENST00000488338 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
LAMTOR4-210ENST00000488338 CHD1O14646 1710 aa24.66■■□□□ 1.54
LAMTOR4-210ENST00000488338 CUL7Q14999 1698 aa24.65■■□□□ 1.54
LAMTOR4-210ENST00000488338 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.53
LAMTOR4-210ENST00000488338 EEA1Q15075 1411 aa24.63■■□□□ 1.53
LAMTOR4-210ENST00000488338 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
LAMTOR4-210ENST00000488338 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
LAMTOR4-210ENST00000488338 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
LAMTOR4-210ENST00000488338 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
LAMTOR4-210ENST00000488338 FAM9AQ8IZU1 332 aaPredicted RBP24.48■■□□□ 1.51
LAMTOR4-210ENST00000488338 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
LAMTOR4-210ENST00000488338 NUP160Q12769 1436 aa24.46■■□□□ 1.51
LAMTOR4-210ENST00000488338 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
LAMTOR4-210ENST00000488338 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
LAMTOR4-210ENST00000488338 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
LAMTOR4-210ENST00000488338 KIAA0586Q9BVV6 1533 aa24.34■■□□□ 1.49
LAMTOR4-210ENST00000488338 KIF21BO75037 1637 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms