RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
GABBR1-215ENST00000488334 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
GABBR1-215ENST00000488334 ABCC9O60706 1549 aa29.66■■■□□ 2.34
GABBR1-215ENST00000488334 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
GABBR1-215ENST00000488334 NACADO15069 1562 aa28.81■■■□□ 2.2
GABBR1-215ENST00000488334 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
GABBR1-215ENST00000488334 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
GABBR1-215ENST00000488334 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
GABBR1-215ENST00000488334 DCAF1Q9Y4B6 1507 aa28.73■■■□□ 2.19
GABBR1-215ENST00000488334 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
GABBR1-215ENST00000488334 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
GABBR1-215ENST00000488334 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
GABBR1-215ENST00000488334 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.03
GABBR1-215ENST00000488334 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
GABBR1-215ENST00000488334 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
GABBR1-215ENST00000488334 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
GABBR1-215ENST00000488334 CC2D2AQ9P2K1 1620 aa26.86■■□□□ 1.89
GABBR1-215ENST00000488334 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
GABBR1-215ENST00000488334 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
GABBR1-215ENST00000488334 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
GABBR1-215ENST00000488334 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
GABBR1-215ENST00000488334 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
GABBR1-215ENST00000488334 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
GABBR1-215ENST00000488334 ATAD2BQ9ULI0 1458 aa26.57■■□□□ 1.84
GABBR1-215ENST00000488334 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
GABBR1-215ENST00000488334 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
GABBR1-215ENST00000488334 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
GABBR1-215ENST00000488334 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
GABBR1-215ENST00000488334 WIZO95785 1651 aa26.27■■□□□ 1.8
GABBR1-215ENST00000488334 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
GABBR1-215ENST00000488334 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
GABBR1-215ENST00000488334 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
GABBR1-215ENST00000488334 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
GABBR1-215ENST00000488334 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
GABBR1-215ENST00000488334 CFTRP13569 1480 aa25.7■■□□□ 1.7
GABBR1-215ENST00000488334 NESP48681 1621 aa25.7■■□□□ 1.7
GABBR1-215ENST00000488334 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
GABBR1-215ENST00000488334 ERCC6Q03468 1493 aa25.62■■□□□ 1.69
GABBR1-215ENST00000488334 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
GABBR1-215ENST00000488334 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
GABBR1-215ENST00000488334 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
GABBR1-215ENST00000488334 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
GABBR1-215ENST00000488334 CUX2O14529 1486 aa25.34■■□□□ 1.65
GABBR1-215ENST00000488334 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
GABBR1-215ENST00000488334 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
GABBR1-215ENST00000488334 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
GABBR1-215ENST00000488334 WDR62O43379 1518 aa25.23■■□□□ 1.63
GABBR1-215ENST00000488334 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
GABBR1-215ENST00000488334 DNMBPQ6XZF7 1577 aa25.07■■□□□ 1.6
GABBR1-215ENST00000488334 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
GABBR1-215ENST00000488334 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
GABBR1-215ENST00000488334 CUX1P39880 1505 aa24.92■■□□□ 1.58
GABBR1-215ENST00000488334 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
GABBR1-215ENST00000488334 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
GABBR1-215ENST00000488334 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
GABBR1-215ENST00000488334 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.56
GABBR1-215ENST00000488334 SOGA1O94964 1423 aa24.81■■□□□ 1.56
GABBR1-215ENST00000488334 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
GABBR1-215ENST00000488334 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
GABBR1-215ENST00000488334 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
GABBR1-215ENST00000488334 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
GABBR1-215ENST00000488334 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
GABBR1-215ENST00000488334 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
GABBR1-215ENST00000488334 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
GABBR1-215ENST00000488334 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
GABBR1-215ENST00000488334 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
GABBR1-215ENST00000488334 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.52
GABBR1-215ENST00000488334 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
GABBR1-215ENST00000488334 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
GABBR1-215ENST00000488334 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
GABBR1-215ENST00000488334 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
GABBR1-215ENST00000488334 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
GABBR1-215ENST00000488334 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
GABBR1-215ENST00000488334 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
GABBR1-215ENST00000488334 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
GABBR1-215ENST00000488334 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
GABBR1-215ENST00000488334 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
GABBR1-215ENST00000488334 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
GABBR1-215ENST00000488334 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
GABBR1-215ENST00000488334 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
GABBR1-215ENST00000488334 FHAD1B1AJZ9 1412 aa24.29■■□□□ 1.48
GABBR1-215ENST00000488334 IGF1RP08069 1367 aa24.28■■□□□ 1.48
GABBR1-215ENST00000488334 FBLN2P98095 1184 aa24.27■■□□□ 1.48
GABBR1-215ENST00000488334 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
GABBR1-215ENST00000488334 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
GABBR1-215ENST00000488334 EEA1Q15075 1411 aa24.19■■□□□ 1.46
GABBR1-215ENST00000488334 CUL7Q14999 1698 aa24.19■■□□□ 1.46
GABBR1-215ENST00000488334 CHD1O14646 1710 aa24.18■■□□□ 1.46
GABBR1-215ENST00000488334 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
GABBR1-215ENST00000488334 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
GABBR1-215ENST00000488334 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
GABBR1-215ENST00000488334 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
GABBR1-215ENST00000488334 NUP160Q12769 1436 aa24.07■■□□□ 1.44
GABBR1-215ENST00000488334 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
GABBR1-215ENST00000488334 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
GABBR1-215ENST00000488334 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
GABBR1-215ENST00000488334 CEP170Q5SW79 1584 aa23.95■■□□□ 1.43
GABBR1-215ENST00000488334 KIAA0586Q9BVV6 1533 aa23.93■■□□□ 1.42
GABBR1-215ENST00000488334 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
GABBR1-215ENST00000488334 JPH4Q96JJ6 628 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms