RNA–Protein interactions for RNA: ENST00000488227.1

RALY-208, Transcript of RALY heterogeneous nuclear ribonucleoprotein, humanhuman

TSL 3

Gene RALY, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALY-208ENST00000488227 AEBP2Q6ZN18 517 aaPredicted RBP33.9■■■■□ 3.02
RALY-208ENST00000488227 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
RALY-208ENST00000488227 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
RALY-208ENST00000488227 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
RALY-208ENST00000488227 SENP3Q9H4L4 574 aaPredicted RBP29.08■■■□□ 2.25
RALY-208ENST00000488227 PHF23Q9BUL5 403 aaPredicted RBP28.58■■■□□ 2.17
RALY-208ENST00000488227 ABCC9O60706 1549 aa28.53■■■□□ 2.16
RALY-208ENST00000488227 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
RALY-208ENST00000488227 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
RALY-208ENST00000488227 MYO15BQ96JP2 1530 aa27.89■■■□□ 2.06
RALY-208ENST00000488227 NACADO15069 1562 aa27.86■■■□□ 2.05
RALY-208ENST00000488227 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
RALY-208ENST00000488227 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.03
RALY-208ENST00000488227 FOXD1Q16676 465 aa27.12■■□□□ 1.93
RALY-208ENST00000488227 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
RALY-208ENST00000488227 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
RALY-208ENST00000488227 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
RALY-208ENST00000488227 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
RALY-208ENST00000488227 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
RALY-208ENST00000488227 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
RALY-208ENST00000488227 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
RALY-208ENST00000488227 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
RALY-208ENST00000488227 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
RALY-208ENST00000488227 POTEDQ86YR6 584 aa25.93■■□□□ 1.74
RALY-208ENST00000488227 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
RALY-208ENST00000488227 CC2D2AQ9P2K1 1620 aa25.86■■□□□ 1.73
RALY-208ENST00000488227 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
RALY-208ENST00000488227 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
RALY-208ENST00000488227 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
RALY-208ENST00000488227 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
RALY-208ENST00000488227 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
RALY-208ENST00000488227 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
RALY-208ENST00000488227 MSH5O43196 834 aa25.66■■□□□ 1.7
RALY-208ENST00000488227 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
RALY-208ENST00000488227 WIZO95785 1651 aa25.61■■□□□ 1.69
RALY-208ENST00000488227 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
RALY-208ENST00000488227 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
RALY-208ENST00000488227 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
RALY-208ENST00000488227 PIAS4Q8N2W9 510 aaPredicted RBP25.22■■□□□ 1.63
RALY-208ENST00000488227 PLPPR3Q6T4P5 718 aa25.11■■□□□ 1.61
RALY-208ENST00000488227 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
RALY-208ENST00000488227 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
RALY-208ENST00000488227 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
RALY-208ENST00000488227 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
RALY-208ENST00000488227 CFTRP13569 1480 aa24.89■■□□□ 1.58
RALY-208ENST00000488227 NESP48681 1621 aa24.79■■□□□ 1.56
RALY-208ENST00000488227 ADRA2BP18089 450 aa24.79■■□□□ 1.56
RALY-208ENST00000488227 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
RALY-208ENST00000488227 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
RALY-208ENST00000488227 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
RALY-208ENST00000488227 ERCC6Q03468 1493 aa24.64■■□□□ 1.53
RALY-208ENST00000488227 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
RALY-208ENST00000488227 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
RALY-208ENST00000488227 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
RALY-208ENST00000488227 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
RALY-208ENST00000488227 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
RALY-208ENST00000488227 WDR62O43379 1518 aa24.35■■□□□ 1.49
RALY-208ENST00000488227 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.49
RALY-208ENST00000488227 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
RALY-208ENST00000488227 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
RALY-208ENST00000488227 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
RALY-208ENST00000488227 CUX1P39880 1505 aa24.26■■□□□ 1.47
RALY-208ENST00000488227 CUX2O14529 1486 aa24.24■■□□□ 1.47
RALY-208ENST00000488227 TOP2BQ02880 1626 aa24.22■■□□□ 1.47
RALY-208ENST00000488227 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
RALY-208ENST00000488227 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
RALY-208ENST00000488227 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
RALY-208ENST00000488227 FGD5Q6ZNL6 1462 aa24.12■■□□□ 1.45
RALY-208ENST00000488227 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
RALY-208ENST00000488227 IFT140Q96RY7 1462 aa24.07■■□□□ 1.44
RALY-208ENST00000488227 SOGA1O94964 1423 aa24.04■■□□□ 1.44
RALY-208ENST00000488227 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
RALY-208ENST00000488227 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
RALY-208ENST00000488227 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
RALY-208ENST00000488227 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
RALY-208ENST00000488227 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
RALY-208ENST00000488227 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
RALY-208ENST00000488227 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
RALY-208ENST00000488227 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
RALY-208ENST00000488227 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
RALY-208ENST00000488227 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
RALY-208ENST00000488227 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.392e-8■■■■■ 70.3
RALY-208ENST00000488227 EEA1Q15075 1411 aa23.73■■□□□ 1.39
RALY-208ENST00000488227 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
RALY-208ENST00000488227 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
RALY-208ENST00000488227 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
RALY-208ENST00000488227 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
RALY-208ENST00000488227 IGF1RP08069 1367 aa23.61■■□□□ 1.37
RALY-208ENST00000488227 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
RALY-208ENST00000488227 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
RALY-208ENST00000488227 CUL7Q14999 1698 aa23.57■■□□□ 1.36
RALY-208ENST00000488227 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
RALY-208ENST00000488227 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
RALY-208ENST00000488227 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
RALY-208ENST00000488227 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
RALY-208ENST00000488227 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
RALY-208ENST00000488227 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
RALY-208ENST00000488227 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
RALY-208ENST00000488227 PRXQ9BXM0 1461 aa23.44■■□□□ 1.34
RALY-208ENST00000488227 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms