RNA–Protein interactions for RNA: ENST00000487998.5

RPP30-209, Transcript of ribonuclease P/MRP subunit p30, humanhuman

TSL 5

Gene RPP30, Length 1,466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30-209ENST00000487998 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
RPP30-209ENST00000487998 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
RPP30-209ENST00000487998 ABCC9O60706 1549 aa26.45■■□□□ 1.82
RPP30-209ENST00000487998 ZCCHC6Q5VYS8 1495 aaKnown RBP25.95■■□□□ 1.74
RPP30-209ENST00000487998 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
RPP30-209ENST00000487998 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
RPP30-209ENST00000487998 NACADO15069 1562 aa25.72■■□□□ 1.71
RPP30-209ENST00000487998 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
RPP30-209ENST00000487998 RB1CC1Q8TDY2 1594 aa25.65■■□□□ 1.7
RPP30-209ENST00000487998 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
RPP30-209ENST00000487998 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
RPP30-209ENST00000487998 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
RPP30-209ENST00000487998 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
RPP30-209ENST00000487998 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
RPP30-209ENST00000487998 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
RPP30-209ENST00000487998 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
RPP30-209ENST00000487998 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
RPP30-209ENST00000487998 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
RPP30-209ENST00000487998 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
RPP30-209ENST00000487998 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
RPP30-209ENST00000487998 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
RPP30-209ENST00000487998 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
RPP30-209ENST00000487998 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
RPP30-209ENST00000487998 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
RPP30-209ENST00000487998 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
RPP30-209ENST00000487998 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
RPP30-209ENST00000487998 WIZO95785 1651 aa23.7■■□□□ 1.38
RPP30-209ENST00000487998 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
RPP30-209ENST00000487998 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
RPP30-209ENST00000487998 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
RPP30-209ENST00000487998 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
RPP30-209ENST00000487998 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
RPP30-209ENST00000487998 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
RPP30-209ENST00000487998 CADPSQ9ULU8 1353 aa23.02■■□□□ 1.28
RPP30-209ENST00000487998 NESP48681 1621 aa23■■□□□ 1.27
RPP30-209ENST00000487998 CFTRP13569 1480 aa22.98■■□□□ 1.27
RPP30-209ENST00000487998 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
RPP30-209ENST00000487998 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
RPP30-209ENST00000487998 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
RPP30-209ENST00000487998 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
RPP30-209ENST00000487998 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
RPP30-209ENST00000487998 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
RPP30-209ENST00000487998 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
RPP30-209ENST00000487998 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
RPP30-209ENST00000487998 WDR62O43379 1518 aa22.53■■□□□ 1.2
RPP30-209ENST00000487998 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
RPP30-209ENST00000487998 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
RPP30-209ENST00000487998 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
RPP30-209ENST00000487998 DNMBPQ6XZF7 1577 aa22.47■■□□□ 1.19
RPP30-209ENST00000487998 CUX2O14529 1486 aa22.45■■□□□ 1.18
RPP30-209ENST00000487998 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
RPP30-209ENST00000487998 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
RPP30-209ENST00000487998 CUX1P39880 1505 aa22.41■■□□□ 1.18
RPP30-209ENST00000487998 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
RPP30-209ENST00000487998 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
RPP30-209ENST00000487998 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
RPP30-209ENST00000487998 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
RPP30-209ENST00000487998 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
RPP30-209ENST00000487998 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
RPP30-209ENST00000487998 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
RPP30-209ENST00000487998 SOGA1O94964 1423 aa22.19■■□□□ 1.14
RPP30-209ENST00000487998 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
RPP30-209ENST00000487998 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
RPP30-209ENST00000487998 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
RPP30-209ENST00000487998 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
RPP30-209ENST00000487998 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
RPP30-209ENST00000487998 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
RPP30-209ENST00000487998 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
RPP30-209ENST00000487998 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
RPP30-209ENST00000487998 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
RPP30-209ENST00000487998 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
RPP30-209ENST00000487998 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.11
RPP30-209ENST00000487998 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
RPP30-209ENST00000487998 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
RPP30-209ENST00000487998 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
RPP30-209ENST00000487998 GRIN2BQ13224 1484 aa21.89■■□□□ 1.1
RPP30-209ENST00000487998 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
RPP30-209ENST00000487998 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
RPP30-209ENST00000487998 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
RPP30-209ENST00000487998 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
RPP30-209ENST00000487998 EEA1Q15075 1411 aa21.77■■□□□ 1.08
RPP30-209ENST00000487998 IGF1RP08069 1367 aa21.76■■□□□ 1.07
RPP30-209ENST00000487998 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
RPP30-209ENST00000487998 CUL7Q14999 1698 aa21.75■■□□□ 1.07
RPP30-209ENST00000487998 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
RPP30-209ENST00000487998 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
RPP30-209ENST00000487998 CHD1O14646 1710 aa21.69■■□□□ 1.06
RPP30-209ENST00000487998 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
RPP30-209ENST00000487998 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
RPP30-209ENST00000487998 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.06
RPP30-209ENST00000487998 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
RPP30-209ENST00000487998 FBLN2P98095 1184 aa21.63■■□□□ 1.05
RPP30-209ENST00000487998 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
RPP30-209ENST00000487998 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
RPP30-209ENST00000487998 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
RPP30-209ENST00000487998 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
RPP30-209ENST00000487998 KIF21BO75037 1637 aa21.53■■□□□ 1.04
RPP30-209ENST00000487998 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
RPP30-209ENST00000487998 NUP160Q12769 1436 aa21.5■■□□□ 1.03
RPP30-209ENST00000487998 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms