RNA–Protein interactions for RNA: ENST00000487873.1

C6orf136-211, Transcript of chromosome 6 open reading frame 136, humanhuman

TSL 3

Gene C6orf136, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf136-211ENST00000487873 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
C6orf136-211ENST00000487873 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.31
C6orf136-211ENST00000487873 ABCC9O60706 1549 aa28.65■■■□□ 2.18
C6orf136-211ENST00000487873 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
C6orf136-211ENST00000487873 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
C6orf136-211ENST00000487873 NACADO15069 1562 aa27.73■■■□□ 2.03
C6orf136-211ENST00000487873 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
C6orf136-211ENST00000487873 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
C6orf136-211ENST00000487873 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
C6orf136-211ENST00000487873 SCRIBQ14160 1630 aa26.85■■□□□ 1.89
C6orf136-211ENST00000487873 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
C6orf136-211ENST00000487873 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
C6orf136-211ENST00000487873 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
C6orf136-211ENST00000487873 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
C6orf136-211ENST00000487873 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
C6orf136-211ENST00000487873 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
C6orf136-211ENST00000487873 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
C6orf136-211ENST00000487873 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
C6orf136-211ENST00000487873 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
C6orf136-211ENST00000487873 SMARCA4P51532 1647 aa25.72■■□□□ 1.71
C6orf136-211ENST00000487873 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
C6orf136-211ENST00000487873 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
C6orf136-211ENST00000487873 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
C6orf136-211ENST00000487873 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
C6orf136-211ENST00000487873 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
C6orf136-211ENST00000487873 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
C6orf136-211ENST00000487873 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
C6orf136-211ENST00000487873 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
C6orf136-211ENST00000487873 WIZO95785 1651 aa25.26■■□□□ 1.63
C6orf136-211ENST00000487873 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
C6orf136-211ENST00000487873 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
C6orf136-211ENST00000487873 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
C6orf136-211ENST00000487873 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
C6orf136-211ENST00000487873 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
C6orf136-211ENST00000487873 NESP48681 1621 aa24.79■■□□□ 1.56
C6orf136-211ENST00000487873 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
C6orf136-211ENST00000487873 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
C6orf136-211ENST00000487873 CFTRP13569 1480 aa24.74■■□□□ 1.55
C6orf136-211ENST00000487873 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
C6orf136-211ENST00000487873 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
C6orf136-211ENST00000487873 CUX2O14529 1486 aa24.45■■□□□ 1.5
C6orf136-211ENST00000487873 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
C6orf136-211ENST00000487873 KIF21AQ7Z4S6 1674 aa24.44■■□□□ 1.5
C6orf136-211ENST00000487873 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
C6orf136-211ENST00000487873 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
C6orf136-211ENST00000487873 WDR62O43379 1518 aa24.31■■□□□ 1.48
C6orf136-211ENST00000487873 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
C6orf136-211ENST00000487873 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
C6orf136-211ENST00000487873 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
C6orf136-211ENST00000487873 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
C6orf136-211ENST00000487873 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
C6orf136-211ENST00000487873 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
C6orf136-211ENST00000487873 CUX1P39880 1505 aa24■■□□□ 1.43
C6orf136-211ENST00000487873 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
C6orf136-211ENST00000487873 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
C6orf136-211ENST00000487873 SOGA1O94964 1423 aa23.93■■□□□ 1.42
C6orf136-211ENST00000487873 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
C6orf136-211ENST00000487873 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
C6orf136-211ENST00000487873 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
C6orf136-211ENST00000487873 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
C6orf136-211ENST00000487873 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
C6orf136-211ENST00000487873 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
C6orf136-211ENST00000487873 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
C6orf136-211ENST00000487873 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
C6orf136-211ENST00000487873 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
C6orf136-211ENST00000487873 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.392e-8■■■■□ 19.9
C6orf136-211ENST00000487873 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
C6orf136-211ENST00000487873 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
C6orf136-211ENST00000487873 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
C6orf136-211ENST00000487873 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
C6orf136-211ENST00000487873 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
C6orf136-211ENST00000487873 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
C6orf136-211ENST00000487873 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
C6orf136-211ENST00000487873 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
C6orf136-211ENST00000487873 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
C6orf136-211ENST00000487873 FBLN2P98095 1184 aa23.49■■□□□ 1.35
C6orf136-211ENST00000487873 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
C6orf136-211ENST00000487873 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
C6orf136-211ENST00000487873 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
C6orf136-211ENST00000487873 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
C6orf136-211ENST00000487873 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
C6orf136-211ENST00000487873 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
C6orf136-211ENST00000487873 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
C6orf136-211ENST00000487873 IGF1RP08069 1367 aa23.38■■□□□ 1.33
C6orf136-211ENST00000487873 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
C6orf136-211ENST00000487873 GRIN2AQ12879 1464 aa23.29■■□□□ 1.32
C6orf136-211ENST00000487873 CHD1O14646 1710 aa23.28■■□□□ 1.32
C6orf136-211ENST00000487873 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.31
C6orf136-211ENST00000487873 EEA1Q15075 1411 aa23.25■■□□□ 1.31
C6orf136-211ENST00000487873 CUL7Q14999 1698 aa23.25■■□□□ 1.31
C6orf136-211ENST00000487873 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
C6orf136-211ENST00000487873 NUP160Q12769 1436 aa23.18■■□□□ 1.3
C6orf136-211ENST00000487873 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
C6orf136-211ENST00000487873 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
C6orf136-211ENST00000487873 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
C6orf136-211ENST00000487873 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
C6orf136-211ENST00000487873 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
C6orf136-211ENST00000487873 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
C6orf136-211ENST00000487873 KIAA0586Q9BVV6 1533 aa23.04■■□□□ 1.28
C6orf136-211ENST00000487873 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms