RNA–Protein interactions for RNA: ENST00000487508.5

SFXN5-218, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 507 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-218ENST00000487508 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
SFXN5-218ENST00000487508 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
SFXN5-218ENST00000487508 ABCC9O60706 1549 aa22.8■■□□□ 1.24
SFXN5-218ENST00000487508 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
SFXN5-218ENST00000487508 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
SFXN5-218ENST00000487508 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
SFXN5-218ENST00000487508 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
SFXN5-218ENST00000487508 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
SFXN5-218ENST00000487508 NACADO15069 1562 aa21.36■■□□□ 1.01
SFXN5-218ENST00000487508 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
SFXN5-218ENST00000487508 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
SFXN5-218ENST00000487508 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
SFXN5-218ENST00000487508 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
SFXN5-218ENST00000487508 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
SFXN5-218ENST00000487508 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
SFXN5-218ENST00000487508 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
SFXN5-218ENST00000487508 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
SFXN5-218ENST00000487508 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
SFXN5-218ENST00000487508 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
SFXN5-218ENST00000487508 CUX2O14529 1486 aa20.23■□□□□ 0.83
SFXN5-218ENST00000487508 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
SFXN5-218ENST00000487508 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
SFXN5-218ENST00000487508 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
SFXN5-218ENST00000487508 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
SFXN5-218ENST00000487508 WIZO95785 1651 aa19.81■□□□□ 0.76
SFXN5-218ENST00000487508 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
SFXN5-218ENST00000487508 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
SFXN5-218ENST00000487508 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
SFXN5-218ENST00000487508 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
SFXN5-218ENST00000487508 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
SFXN5-218ENST00000487508 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
SFXN5-218ENST00000487508 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
SFXN5-218ENST00000487508 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
SFXN5-218ENST00000487508 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
SFXN5-218ENST00000487508 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
SFXN5-218ENST00000487508 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
SFXN5-218ENST00000487508 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
SFXN5-218ENST00000487508 NESP48681 1621 aa19.29■□□□□ 0.68
SFXN5-218ENST00000487508 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
SFXN5-218ENST00000487508 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
SFXN5-218ENST00000487508 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
SFXN5-218ENST00000487508 CFTRP13569 1480 aa19.1■□□□□ 0.65
SFXN5-218ENST00000487508 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
SFXN5-218ENST00000487508 PDS5BQ9NTI5 1447 aa18.97■□□□□ 0.63
SFXN5-218ENST00000487508 RIMBP3CA6NJZ7 1639 aa18.96■□□□□ 0.63
SFXN5-218ENST00000487508 RIMBP3BA6NNM3 1639 aa18.96■□□□□ 0.63
SFXN5-218ENST00000487508 RIMBP3Q9UFD9 1639 aa18.96■□□□□ 0.63
SFXN5-218ENST00000487508 WDR62O43379 1518 aa18.95■□□□□ 0.62
SFXN5-218ENST00000487508 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
SFXN5-218ENST00000487508 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
SFXN5-218ENST00000487508 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
SFXN5-218ENST00000487508 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
SFXN5-218ENST00000487508 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
SFXN5-218ENST00000487508 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
SFXN5-218ENST00000487508 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
SFXN5-218ENST00000487508 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
SFXN5-218ENST00000487508 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
SFXN5-218ENST00000487508 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
SFXN5-218ENST00000487508 CUX1P39880 1505 aa18.72■□□□□ 0.59
SFXN5-218ENST00000487508 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
SFXN5-218ENST00000487508 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
SFXN5-218ENST00000487508 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
SFXN5-218ENST00000487508 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
SFXN5-218ENST00000487508 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
SFXN5-218ENST00000487508 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
SFXN5-218ENST00000487508 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
SFXN5-218ENST00000487508 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
SFXN5-218ENST00000487508 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
SFXN5-218ENST00000487508 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
SFXN5-218ENST00000487508 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
SFXN5-218ENST00000487508 SOGA1O94964 1423 aa18.47■□□□□ 0.55
SFXN5-218ENST00000487508 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
SFXN5-218ENST00000487508 IFT140Q96RY7 1462 aa18.46■□□□□ 0.54
SFXN5-218ENST00000487508 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
SFXN5-218ENST00000487508 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
SFXN5-218ENST00000487508 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
SFXN5-218ENST00000487508 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
SFXN5-218ENST00000487508 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
SFXN5-218ENST00000487508 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
SFXN5-218ENST00000487508 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
SFXN5-218ENST00000487508 CHD1O14646 1710 aa18.3■□□□□ 0.52
SFXN5-218ENST00000487508 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■■■□ 22.1
SFXN5-218ENST00000487508 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
SFXN5-218ENST00000487508 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
SFXN5-218ENST00000487508 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
SFXN5-218ENST00000487508 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
SFXN5-218ENST00000487508 EEA1Q15075 1411 aa18.23■□□□□ 0.51
SFXN5-218ENST00000487508 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
SFXN5-218ENST00000487508 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
SFXN5-218ENST00000487508 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
SFXN5-218ENST00000487508 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
SFXN5-218ENST00000487508 CUL7Q14999 1698 aa18.15■□□□□ 0.5
SFXN5-218ENST00000487508 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
SFXN5-218ENST00000487508 IGF1RP08069 1367 aa18.14■□□□□ 0.49
SFXN5-218ENST00000487508 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
SFXN5-218ENST00000487508 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
SFXN5-218ENST00000487508 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.49
SFXN5-218ENST00000487508 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
SFXN5-218ENST00000487508 KIF21BO75037 1637 aa18.05■□□□□ 0.48
SFXN5-218ENST00000487508 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms