RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
CCNB3-206ENST00000487204 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
CCNB3-206ENST00000487204 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
CCNB3-206ENST00000487204 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
CCNB3-206ENST00000487204 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
CCNB3-206ENST00000487204 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
CCNB3-206ENST00000487204 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
CCNB3-206ENST00000487204 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
CCNB3-206ENST00000487204 ABCC9O60706 1549 aa13.56□□□□□ -0.24
CCNB3-206ENST00000487204 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CCNB3-206ENST00000487204 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
CCNB3-206ENST00000487204 NACADO15069 1562 aa13.43□□□□□ -0.26
CCNB3-206ENST00000487204 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
CCNB3-206ENST00000487204 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CCNB3-206ENST00000487204 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
CCNB3-206ENST00000487204 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
CCNB3-206ENST00000487204 UNC13AQ9UPW8 1703 aa12.89□□□□□ -0.35
CCNB3-206ENST00000487204 FOXD1Q16676 465 aa12.88□□□□□ -0.35
CCNB3-206ENST00000487204 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
CCNB3-206ENST00000487204 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
CCNB3-206ENST00000487204 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCNB3-206ENST00000487204 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
CCNB3-206ENST00000487204 BAZ1AQ9NRL2 1556 aaPredicted RBP12.7□□□□□ -0.38
CCNB3-206ENST00000487204 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
CCNB3-206ENST00000487204 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
CCNB3-206ENST00000487204 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
CCNB3-206ENST00000487204 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
CCNB3-206ENST00000487204 PEG3Q9GZU2 1588 aa12.5□□□□□ -0.41
CCNB3-206ENST00000487204 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
CCNB3-206ENST00000487204 WIZO95785 1651 aa12.48□□□□□ -0.41
CCNB3-206ENST00000487204 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
CCNB3-206ENST00000487204 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
CCNB3-206ENST00000487204 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
CCNB3-206ENST00000487204 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
CCNB3-206ENST00000487204 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
CCNB3-206ENST00000487204 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
CCNB3-206ENST00000487204 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
CCNB3-206ENST00000487204 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
CCNB3-206ENST00000487204 MSH5O43196 834 aa12.23□□□□□ -0.45
CCNB3-206ENST00000487204 ADRA2BP18089 450 aa12.21□□□□□ -0.45
CCNB3-206ENST00000487204 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
CCNB3-206ENST00000487204 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
CCNB3-206ENST00000487204 CFTRP13569 1480 aa12.07□□□□□ -0.48
CCNB3-206ENST00000487204 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
CCNB3-206ENST00000487204 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
CCNB3-206ENST00000487204 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
CCNB3-206ENST00000487204 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
CCNB3-206ENST00000487204 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
CCNB3-206ENST00000487204 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
CCNB3-206ENST00000487204 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
CCNB3-206ENST00000487204 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
CCNB3-206ENST00000487204 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
CCNB3-206ENST00000487204 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
CCNB3-206ENST00000487204 NESP48681 1621 aa11.85□□□□□ -0.51
CCNB3-206ENST00000487204 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
CCNB3-206ENST00000487204 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
CCNB3-206ENST00000487204 EEA1Q15075 1411 aa11.84□□□□□ -0.51
CCNB3-206ENST00000487204 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
CCNB3-206ENST00000487204 CUX1P39880 1505 aa11.81□□□□□ -0.52
CCNB3-206ENST00000487204 DNMBPQ6XZF7 1577 aa11.78□□□□□ -0.52
CCNB3-206ENST00000487204 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
CCNB3-206ENST00000487204 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
CCNB3-206ENST00000487204 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
CCNB3-206ENST00000487204 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
CCNB3-206ENST00000487204 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
CCNB3-206ENST00000487204 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
CCNB3-206ENST00000487204 SOGA1O94964 1423 aa11.7□□□□□ -0.54
CCNB3-206ENST00000487204 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
CCNB3-206ENST00000487204 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
CCNB3-206ENST00000487204 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
CCNB3-206ENST00000487204 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
CCNB3-206ENST00000487204 WDR62O43379 1518 aa11.65□□□□□ -0.55
CCNB3-206ENST00000487204 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.55
CCNB3-206ENST00000487204 CUX2O14529 1486 aa11.63□□□□□ -0.55
CCNB3-206ENST00000487204 RUSC2Q8N2Y8 1516 aa11.62□□□□□ -0.55
CCNB3-206ENST00000487204 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
CCNB3-206ENST00000487204 KIF21BO75037 1637 aa11.6□□□□□ -0.55
CCNB3-206ENST00000487204 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
CCNB3-206ENST00000487204 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
CCNB3-206ENST00000487204 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CCNB3-206ENST00000487204 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
CCNB3-206ENST00000487204 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.56
CCNB3-206ENST00000487204 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
CCNB3-206ENST00000487204 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
CCNB3-206ENST00000487204 IGF1RP08069 1367 aa11.55□□□□□ -0.56
CCNB3-206ENST00000487204 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
CCNB3-206ENST00000487204 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
CCNB3-206ENST00000487204 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
CCNB3-206ENST00000487204 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
CCNB3-206ENST00000487204 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
CCNB3-206ENST00000487204 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
CCNB3-206ENST00000487204 CUL7Q14999 1698 aa11.51□□□□□ -0.57
CCNB3-206ENST00000487204 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
CCNB3-206ENST00000487204 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
CCNB3-206ENST00000487204 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
CCNB3-206ENST00000487204 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
CCNB3-206ENST00000487204 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCNB3-206ENST00000487204 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
CCNB3-206ENST00000487204 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
CCNB3-206ENST00000487204 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms