RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 NISCHQ9Y2I1 1504 aa27.89■■■□□ 2.06
LINC00996-202ENST00000486954 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
LINC00996-202ENST00000486954 ABCC9O60706 1549 aa23.99■■□□□ 1.43
LINC00996-202ENST00000486954 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
LINC00996-202ENST00000486954 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
LINC00996-202ENST00000486954 NACADO15069 1562 aa23.22■■□□□ 1.31
LINC00996-202ENST00000486954 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
LINC00996-202ENST00000486954 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
LINC00996-202ENST00000486954 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
LINC00996-202ENST00000486954 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
LINC00996-202ENST00000486954 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
LINC00996-202ENST00000486954 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
LINC00996-202ENST00000486954 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
LINC00996-202ENST00000486954 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
LINC00996-202ENST00000486954 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
LINC00996-202ENST00000486954 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
LINC00996-202ENST00000486954 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
LINC00996-202ENST00000486954 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
LINC00996-202ENST00000486954 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
LINC00996-202ENST00000486954 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
LINC00996-202ENST00000486954 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
LINC00996-202ENST00000486954 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
LINC00996-202ENST00000486954 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
LINC00996-202ENST00000486954 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
LINC00996-202ENST00000486954 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
LINC00996-202ENST00000486954 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
LINC00996-202ENST00000486954 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
LINC00996-202ENST00000486954 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
LINC00996-202ENST00000486954 WIZO95785 1651 aa21.28■■□□□ 1
LINC00996-202ENST00000486954 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
LINC00996-202ENST00000486954 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
LINC00996-202ENST00000486954 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
LINC00996-202ENST00000486954 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
LINC00996-202ENST00000486954 NESP48681 1621 aa20.78■□□□□ 0.92
LINC00996-202ENST00000486954 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
LINC00996-202ENST00000486954 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
LINC00996-202ENST00000486954 CFTRP13569 1480 aa20.69■□□□□ 0.9
LINC00996-202ENST00000486954 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
LINC00996-202ENST00000486954 PRDM2Q13029 1718 aa20.64■□□□□ 0.89
LINC00996-202ENST00000486954 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
LINC00996-202ENST00000486954 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
LINC00996-202ENST00000486954 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
LINC00996-202ENST00000486954 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
LINC00996-202ENST00000486954 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
LINC00996-202ENST00000486954 CUX2O14529 1486 aa20.41■□□□□ 0.86
LINC00996-202ENST00000486954 WDR62O43379 1518 aa20.37■□□□□ 0.85
LINC00996-202ENST00000486954 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
LINC00996-202ENST00000486954 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
LINC00996-202ENST00000486954 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
LINC00996-202ENST00000486954 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
LINC00996-202ENST00000486954 CUX1P39880 1505 aa20.15■□□□□ 0.82
LINC00996-202ENST00000486954 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
LINC00996-202ENST00000486954 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
LINC00996-202ENST00000486954 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
LINC00996-202ENST00000486954 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
LINC00996-202ENST00000486954 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
LINC00996-202ENST00000486954 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
LINC00996-202ENST00000486954 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
LINC00996-202ENST00000486954 SOGA1O94964 1423 aa20■□□□□ 0.79
LINC00996-202ENST00000486954 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
LINC00996-202ENST00000486954 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
LINC00996-202ENST00000486954 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
LINC00996-202ENST00000486954 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
LINC00996-202ENST00000486954 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
LINC00996-202ENST00000486954 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
LINC00996-202ENST00000486954 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
LINC00996-202ENST00000486954 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.77
LINC00996-202ENST00000486954 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
LINC00996-202ENST00000486954 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
LINC00996-202ENST00000486954 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
LINC00996-202ENST00000486954 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
LINC00996-202ENST00000486954 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
LINC00996-202ENST00000486954 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
LINC00996-202ENST00000486954 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
LINC00996-202ENST00000486954 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
LINC00996-202ENST00000486954 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
LINC00996-202ENST00000486954 CHD1O14646 1710 aa19.63■□□□□ 0.73
LINC00996-202ENST00000486954 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
LINC00996-202ENST00000486954 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
LINC00996-202ENST00000486954 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
LINC00996-202ENST00000486954 FBLN2P98095 1184 aa19.61■□□□□ 0.73
LINC00996-202ENST00000486954 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
LINC00996-202ENST00000486954 CUL7Q14999 1698 aa19.58■□□□□ 0.72
LINC00996-202ENST00000486954 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
LINC00996-202ENST00000486954 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
LINC00996-202ENST00000486954 IGF1RP08069 1367 aa19.52■□□□□ 0.72
LINC00996-202ENST00000486954 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
LINC00996-202ENST00000486954 EEA1Q15075 1411 aa19.51■□□□□ 0.71
LINC00996-202ENST00000486954 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
LINC00996-202ENST00000486954 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
LINC00996-202ENST00000486954 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
LINC00996-202ENST00000486954 NUP160Q12769 1436 aa19.4■□□□□ 0.7
LINC00996-202ENST00000486954 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
LINC00996-202ENST00000486954 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
LINC00996-202ENST00000486954 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
LINC00996-202ENST00000486954 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
LINC00996-202ENST00000486954 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
LINC00996-202ENST00000486954 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
LINC00996-202ENST00000486954 KIAA0586Q9BVV6 1533 aa19.27■□□□□ 0.68
LINC00996-202ENST00000486954 KIF21BO75037 1637 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms