RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, humanhuman

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC1-213ENST00000486695 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
KIFC1-213ENST00000486695 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
KIFC1-213ENST00000486695 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
KIFC1-213ENST00000486695 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
KIFC1-213ENST00000486695 ABCC9O60706 1549 aa17.72■□□□□ 0.43
KIFC1-213ENST00000486695 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
KIFC1-213ENST00000486695 DCAF8L2P0C7V8 631 aa17.04■□□□□ 0.32
KIFC1-213ENST00000486695 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
KIFC1-213ENST00000486695 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
KIFC1-213ENST00000486695 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
KIFC1-213ENST00000486695 NACADO15069 1562 aa16.77■□□□□ 0.27
KIFC1-213ENST00000486695 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
KIFC1-213ENST00000486695 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
KIFC1-213ENST00000486695 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
KIFC1-213ENST00000486695 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
KIFC1-213ENST00000486695 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
KIFC1-213ENST00000486695 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
KIFC1-213ENST00000486695 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
KIFC1-213ENST00000486695 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
KIFC1-213ENST00000486695 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
KIFC1-213ENST00000486695 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
KIFC1-213ENST00000486695 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
KIFC1-213ENST00000486695 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
KIFC1-213ENST00000486695 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
KIFC1-213ENST00000486695 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.13
KIFC1-213ENST00000486695 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
KIFC1-213ENST00000486695 WIZO95785 1651 aa15.72■□□□□ 0.11
KIFC1-213ENST00000486695 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
KIFC1-213ENST00000486695 SMARCA2P51531 1590 aa15.58■□□□□ 0.09
KIFC1-213ENST00000486695 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
KIFC1-213ENST00000486695 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
KIFC1-213ENST00000486695 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
KIFC1-213ENST00000486695 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
KIFC1-213ENST00000486695 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
KIFC1-213ENST00000486695 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
KIFC1-213ENST00000486695 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
KIFC1-213ENST00000486695 CUX2O14529 1486 aa15.33■□□□□ 0.04
KIFC1-213ENST00000486695 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
KIFC1-213ENST00000486695 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
KIFC1-213ENST00000486695 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
KIFC1-213ENST00000486695 NESP48681 1621 aa15.19■□□□□ 0.02
KIFC1-213ENST00000486695 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
KIFC1-213ENST00000486695 CFTRP13569 1480 aa15.08■□□□□ 0
KIFC1-213ENST00000486695 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
KIFC1-213ENST00000486695 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
KIFC1-213ENST00000486695 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
KIFC1-213ENST00000486695 ABCC8Q09428 1581 aa15.03■□□□□ -0
KIFC1-213ENST00000486695 PRDM2Q13029 1718 aa15.03■□□□□ -0
KIFC1-213ENST00000486695 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
KIFC1-213ENST00000486695 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
KIFC1-213ENST00000486695 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
KIFC1-213ENST00000486695 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
KIFC1-213ENST00000486695 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
KIFC1-213ENST00000486695 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
KIFC1-213ENST00000486695 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
KIFC1-213ENST00000486695 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
KIFC1-213ENST00000486695 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
KIFC1-213ENST00000486695 WDR62O43379 1518 aa14.82□□□□□ -0.04
KIFC1-213ENST00000486695 CUX1P39880 1505 aa14.82□□□□□ -0.04
KIFC1-213ENST00000486695 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
KIFC1-213ENST00000486695 EEA1Q15075 1411 aa14.77□□□□□ -0.04
KIFC1-213ENST00000486695 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
KIFC1-213ENST00000486695 SOGA1O94964 1423 aa14.74□□□□□ -0.05
KIFC1-213ENST00000486695 LOC105371045A0A1W2PR82 267 aa14.71□□□□□ -0.05
KIFC1-213ENST00000486695 TOPBP1Q92547 1522 aa14.71□□□□□ -0.06
KIFC1-213ENST00000486695 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
KIFC1-213ENST00000486695 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
KIFC1-213ENST00000486695 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
KIFC1-213ENST00000486695 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
KIFC1-213ENST00000486695 KIF27Q86VH2 1401 aa14.64□□□□□ -0.07
KIFC1-213ENST00000486695 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
KIFC1-213ENST00000486695 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
KIFC1-213ENST00000486695 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
KIFC1-213ENST00000486695 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
KIFC1-213ENST00000486695 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
KIFC1-213ENST00000486695 KIF21BO75037 1637 aa14.55□□□□□ -0.08
KIFC1-213ENST00000486695 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
KIFC1-213ENST00000486695 UBTFP17480 764 aaKnown RBP14.51□□□□□ -0.09
KIFC1-213ENST00000486695 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
KIFC1-213ENST00000486695 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
KIFC1-213ENST00000486695 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
KIFC1-213ENST00000486695 IGF1RP08069 1367 aa14.47□□□□□ -0.09
KIFC1-213ENST00000486695 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
KIFC1-213ENST00000486695 ZNF608Q9ULD9 1512 aaPredicted RBP14.47□□□□□ -0.09
KIFC1-213ENST00000486695 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
KIFC1-213ENST00000486695 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.09
KIFC1-213ENST00000486695 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
KIFC1-213ENST00000486695 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
KIFC1-213ENST00000486695 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
KIFC1-213ENST00000486695 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
KIFC1-213ENST00000486695 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
KIFC1-213ENST00000486695 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
KIFC1-213ENST00000486695 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
KIFC1-213ENST00000486695 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
KIFC1-213ENST00000486695 CUL7Q14999 1698 aa14.41□□□□□ -0.1
KIFC1-213ENST00000486695 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
KIFC1-213ENST00000486695 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
KIFC1-213ENST00000486695 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
KIFC1-213ENST00000486695 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
KIFC1-213ENST00000486695 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.111e-9■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms