RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
HDHD3-203ENST00000485934 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
HDHD3-203ENST00000485934 ABCC9O60706 1549 aa31.74■■■□□ 2.67
HDHD3-203ENST00000485934 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
HDHD3-203ENST00000485934 NACADO15069 1562 aa30.66■■■□□ 2.5
HDHD3-203ENST00000485934 RB1CC1Q8TDY2 1594 aa30.64■■■□□ 2.5
HDHD3-203ENST00000485934 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
HDHD3-203ENST00000485934 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
HDHD3-203ENST00000485934 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
HDHD3-203ENST00000485934 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
HDHD3-203ENST00000485934 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
HDHD3-203ENST00000485934 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
HDHD3-203ENST00000485934 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
HDHD3-203ENST00000485934 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
HDHD3-203ENST00000485934 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
HDHD3-203ENST00000485934 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
HDHD3-203ENST00000485934 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
HDHD3-203ENST00000485934 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
HDHD3-203ENST00000485934 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
HDHD3-203ENST00000485934 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
HDHD3-203ENST00000485934 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
HDHD3-203ENST00000485934 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
HDHD3-203ENST00000485934 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
HDHD3-203ENST00000485934 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
HDHD3-203ENST00000485934 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
HDHD3-203ENST00000485934 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
HDHD3-203ENST00000485934 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
HDHD3-203ENST00000485934 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
HDHD3-203ENST00000485934 WIZO95785 1651 aa27.89■■■□□ 2.06
HDHD3-203ENST00000485934 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
HDHD3-203ENST00000485934 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
HDHD3-203ENST00000485934 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
HDHD3-203ENST00000485934 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
HDHD3-203ENST00000485934 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
HDHD3-203ENST00000485934 NESP48681 1621 aa27.44■■□□□ 1.98
HDHD3-203ENST00000485934 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
HDHD3-203ENST00000485934 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
HDHD3-203ENST00000485934 CFTRP13569 1480 aa27.35■■□□□ 1.97
HDHD3-203ENST00000485934 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
HDHD3-203ENST00000485934 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
HDHD3-203ENST00000485934 CUX2O14529 1486 aa27.09■■□□□ 1.93
HDHD3-203ENST00000485934 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
HDHD3-203ENST00000485934 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
HDHD3-203ENST00000485934 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
HDHD3-203ENST00000485934 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
HDHD3-203ENST00000485934 WDR62O43379 1518 aa26.88■■□□□ 1.89
HDHD3-203ENST00000485934 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
HDHD3-203ENST00000485934 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
HDHD3-203ENST00000485934 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
HDHD3-203ENST00000485934 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
HDHD3-203ENST00000485934 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
HDHD3-203ENST00000485934 WRNQ14191 1432 aaPredicted RBP eCLIP26.51■■□□□ 1.83
HDHD3-203ENST00000485934 CUX1P39880 1505 aa26.49■■□□□ 1.83
HDHD3-203ENST00000485934 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
HDHD3-203ENST00000485934 SOGA1O94964 1423 aa26.48■■□□□ 1.83
HDHD3-203ENST00000485934 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
HDHD3-203ENST00000485934 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
HDHD3-203ENST00000485934 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
HDHD3-203ENST00000485934 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
HDHD3-203ENST00000485934 ZNF608Q9ULD9 1512 aaPredicted RBP26.31■■□□□ 1.8
HDHD3-203ENST00000485934 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
HDHD3-203ENST00000485934 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
HDHD3-203ENST00000485934 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
HDHD3-203ENST00000485934 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.796e-16■■■■■ 34.9
HDHD3-203ENST00000485934 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
HDHD3-203ENST00000485934 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
HDHD3-203ENST00000485934 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
HDHD3-203ENST00000485934 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
HDHD3-203ENST00000485934 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
HDHD3-203ENST00000485934 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
HDHD3-203ENST00000485934 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
HDHD3-203ENST00000485934 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
HDHD3-203ENST00000485934 FBLN2P98095 1184 aa26.04■■□□□ 1.76
HDHD3-203ENST00000485934 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
HDHD3-203ENST00000485934 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
HDHD3-203ENST00000485934 KIF27Q86VH2 1401 aa26■■□□□ 1.75
HDHD3-203ENST00000485934 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
HDHD3-203ENST00000485934 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
HDHD3-203ENST00000485934 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
HDHD3-203ENST00000485934 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
HDHD3-203ENST00000485934 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
HDHD3-203ENST00000485934 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
HDHD3-203ENST00000485934 IGF1RP08069 1367 aa25.84■■□□□ 1.73
HDHD3-203ENST00000485934 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
HDHD3-203ENST00000485934 CHD1O14646 1710 aa25.74■■□□□ 1.71
HDHD3-203ENST00000485934 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
HDHD3-203ENST00000485934 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
HDHD3-203ENST00000485934 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
HDHD3-203ENST00000485934 CUL7Q14999 1698 aa25.66■■□□□ 1.7
HDHD3-203ENST00000485934 EEA1Q15075 1411 aa25.64■■□□□ 1.7
HDHD3-203ENST00000485934 NUP160Q12769 1436 aa25.63■■□□□ 1.69
HDHD3-203ENST00000485934 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
HDHD3-203ENST00000485934 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
HDHD3-203ENST00000485934 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
HDHD3-203ENST00000485934 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
HDHD3-203ENST00000485934 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
HDHD3-203ENST00000485934 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
HDHD3-203ENST00000485934 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
HDHD3-203ENST00000485934 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
HDHD3-203ENST00000485934 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms