RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, humanhuman

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-208ENST00000485758 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
TPRKB-208ENST00000485758 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
TPRKB-208ENST00000485758 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
TPRKB-208ENST00000485758 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
TPRKB-208ENST00000485758 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
TPRKB-208ENST00000485758 FOXD1Q16676 465 aa23.7■■□□□ 1.38
TPRKB-208ENST00000485758 CCDC180Q9P1Z9 1646 aa22.87■■□□□ 1.25
TPRKB-208ENST00000485758 ABCC9O60706 1549 aa22.24■■□□□ 1.15
TPRKB-208ENST00000485758 MSH5O43196 834 aa22.18■■□□□ 1.14
TPRKB-208ENST00000485758 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
TPRKB-208ENST00000485758 POTEDQ86YR6 584 aa22.13■■□□□ 1.13
TPRKB-208ENST00000485758 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
TPRKB-208ENST00000485758 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
TPRKB-208ENST00000485758 ADRA2BP18089 450 aa21.85■■□□□ 1.09
TPRKB-208ENST00000485758 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
TPRKB-208ENST00000485758 NACADO15069 1562 aa21.44■■□□□ 1.02
TPRKB-208ENST00000485758 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
TPRKB-208ENST00000485758 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
TPRKB-208ENST00000485758 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
TPRKB-208ENST00000485758 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
TPRKB-208ENST00000485758 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
TPRKB-208ENST00000485758 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
TPRKB-208ENST00000485758 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
TPRKB-208ENST00000485758 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
TPRKB-208ENST00000485758 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
TPRKB-208ENST00000485758 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
TPRKB-208ENST00000485758 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
TPRKB-208ENST00000485758 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
TPRKB-208ENST00000485758 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
TPRKB-208ENST00000485758 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
TPRKB-208ENST00000485758 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
TPRKB-208ENST00000485758 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
TPRKB-208ENST00000485758 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
TPRKB-208ENST00000485758 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
TPRKB-208ENST00000485758 SMARCA2P51531 1590 aa19.77■□□□□ 0.76
TPRKB-208ENST00000485758 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
TPRKB-208ENST00000485758 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
TPRKB-208ENST00000485758 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
TPRKB-208ENST00000485758 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
TPRKB-208ENST00000485758 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
TPRKB-208ENST00000485758 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
TPRKB-208ENST00000485758 WIZO95785 1651 aa19.59■□□□□ 0.73
TPRKB-208ENST00000485758 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
TPRKB-208ENST00000485758 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
TPRKB-208ENST00000485758 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
TPRKB-208ENST00000485758 HOXD11P31277 338 aaPredicted RBP19.3■□□□□ 0.68
TPRKB-208ENST00000485758 NESP48681 1621 aa19.27■□□□□ 0.68
TPRKB-208ENST00000485758 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
TPRKB-208ENST00000485758 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
TPRKB-208ENST00000485758 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
TPRKB-208ENST00000485758 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
TPRKB-208ENST00000485758 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
TPRKB-208ENST00000485758 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
TPRKB-208ENST00000485758 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
TPRKB-208ENST00000485758 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
TPRKB-208ENST00000485758 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
TPRKB-208ENST00000485758 CFTRP13569 1480 aa19.07■□□□□ 0.64
TPRKB-208ENST00000485758 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
TPRKB-208ENST00000485758 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
TPRKB-208ENST00000485758 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
TPRKB-208ENST00000485758 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
TPRKB-208ENST00000485758 CUX2O14529 1486 aa18.98■□□□□ 0.63
TPRKB-208ENST00000485758 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
TPRKB-208ENST00000485758 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
TPRKB-208ENST00000485758 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
TPRKB-208ENST00000485758 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
TPRKB-208ENST00000485758 WDR62O43379 1518 aa18.87■□□□□ 0.61
TPRKB-208ENST00000485758 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
TPRKB-208ENST00000485758 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
TPRKB-208ENST00000485758 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
TPRKB-208ENST00000485758 ABCC8Q09428 1581 aa18.66■□□□□ 0.58
TPRKB-208ENST00000485758 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
TPRKB-208ENST00000485758 CUX1P39880 1505 aa18.54■□□□□ 0.56
TPRKB-208ENST00000485758 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
TPRKB-208ENST00000485758 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
TPRKB-208ENST00000485758 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
TPRKB-208ENST00000485758 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
TPRKB-208ENST00000485758 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.55
TPRKB-208ENST00000485758 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
TPRKB-208ENST00000485758 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
TPRKB-208ENST00000485758 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
TPRKB-208ENST00000485758 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
TPRKB-208ENST00000485758 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
TPRKB-208ENST00000485758 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
TPRKB-208ENST00000485758 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
TPRKB-208ENST00000485758 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
TPRKB-208ENST00000485758 SOGA1O94964 1423 aa18.4■□□□□ 0.54
TPRKB-208ENST00000485758 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
TPRKB-208ENST00000485758 AQRO60306 1485 aaKnown RBP eCLIP18.32■□□□□ 0.52
TPRKB-208ENST00000485758 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
TPRKB-208ENST00000485758 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
TPRKB-208ENST00000485758 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
TPRKB-208ENST00000485758 PBRM1Q86U86 1689 aa18.27■□□□□ 0.52
TPRKB-208ENST00000485758 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
TPRKB-208ENST00000485758 CHD1O14646 1710 aa18.23■□□□□ 0.51
TPRKB-208ENST00000485758 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
TPRKB-208ENST00000485758 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
TPRKB-208ENST00000485758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
TPRKB-208ENST00000485758 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
TPRKB-208ENST00000485758 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms