RNA–Protein interactions for RNA: ENST00000485751.1

KRT23-204, Transcript of keratin 23, humanhuman

TSL 3

Gene KRT23, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-204ENST00000485751 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
KRT23-204ENST00000485751 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
KRT23-204ENST00000485751 ABCC9O60706 1549 aa34.17■■■■□ 3.06
KRT23-204ENST00000485751 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
KRT23-204ENST00000485751 DCAF8L2P0C7V8 631 aa33.24■■■□□ 2.91
KRT23-204ENST00000485751 NACADO15069 1562 aa33.1■■■□□ 2.89
KRT23-204ENST00000485751 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
KRT23-204ENST00000485751 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
KRT23-204ENST00000485751 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
KRT23-204ENST00000485751 UNC13AQ9UPW8 1703 aa32.25■■■□□ 2.75
KRT23-204ENST00000485751 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
KRT23-204ENST00000485751 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
KRT23-204ENST00000485751 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
KRT23-204ENST00000485751 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
KRT23-204ENST00000485751 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
KRT23-204ENST00000485751 CECR2Q9BXF3 1484 aa31.06■■■□□ 2.56
KRT23-204ENST00000485751 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
KRT23-204ENST00000485751 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
KRT23-204ENST00000485751 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
KRT23-204ENST00000485751 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
KRT23-204ENST00000485751 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
KRT23-204ENST00000485751 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
KRT23-204ENST00000485751 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
KRT23-204ENST00000485751 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
KRT23-204ENST00000485751 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
KRT23-204ENST00000485751 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
KRT23-204ENST00000485751 WIZO95785 1651 aa30.45■■■□□ 2.46
KRT23-204ENST00000485751 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
KRT23-204ENST00000485751 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
KRT23-204ENST00000485751 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
KRT23-204ENST00000485751 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
KRT23-204ENST00000485751 CCDC88BA6NC98 1476 aa29.82■■■□□ 2.36
KRT23-204ENST00000485751 CADPSQ9ULU8 1353 aa29.7■■■□□ 2.35
KRT23-204ENST00000485751 NESP48681 1621 aa29.68■■■□□ 2.34
KRT23-204ENST00000485751 LAMC3Q9Y6N6 1575 aa29.66■■■□□ 2.34
KRT23-204ENST00000485751 CFTRP13569 1480 aa29.6■■■□□ 2.33
KRT23-204ENST00000485751 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
KRT23-204ENST00000485751 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
KRT23-204ENST00000485751 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
KRT23-204ENST00000485751 FANCD2Q9BXW9 1451 aa29.34■■■□□ 2.29
KRT23-204ENST00000485751 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
KRT23-204ENST00000485751 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
KRT23-204ENST00000485751 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
KRT23-204ENST00000485751 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
KRT23-204ENST00000485751 WDR62O43379 1518 aa29.02■■■□□ 2.24
KRT23-204ENST00000485751 URB2Q14146 1524 aaKnown RBP29.01■■■□□ 2.23
KRT23-204ENST00000485751 CUX2O14529 1486 aa28.97■■■□□ 2.23
KRT23-204ENST00000485751 ABCC8Q09428 1581 aa28.95■■■□□ 2.22
KRT23-204ENST00000485751 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
KRT23-204ENST00000485751 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
KRT23-204ENST00000485751 CUX1P39880 1505 aa28.84■■■□□ 2.21
KRT23-204ENST00000485751 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
KRT23-204ENST00000485751 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
KRT23-204ENST00000485751 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.18
KRT23-204ENST00000485751 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
KRT23-204ENST00000485751 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
KRT23-204ENST00000485751 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
KRT23-204ENST00000485751 IFT140Q96RY7 1462 aa28.64■■■□□ 2.17
KRT23-204ENST00000485751 SOGA1O94964 1423 aa28.6■■■□□ 2.17
KRT23-204ENST00000485751 RAD54L2Q9Y4B4 1467 aa28.58■■■□□ 2.17
KRT23-204ENST00000485751 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
KRT23-204ENST00000485751 ZNF608Q9ULD9 1512 aaPredicted RBP28.47■■■□□ 2.15
KRT23-204ENST00000485751 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
KRT23-204ENST00000485751 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
KRT23-204ENST00000485751 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
KRT23-204ENST00000485751 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.14
KRT23-204ENST00000485751 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.13
KRT23-204ENST00000485751 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
KRT23-204ENST00000485751 EIF4G3O43432 1585 aaKnown RBP28.36■■■□□ 2.13
KRT23-204ENST00000485751 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
KRT23-204ENST00000485751 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
KRT23-204ENST00000485751 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
KRT23-204ENST00000485751 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
KRT23-204ENST00000485751 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
KRT23-204ENST00000485751 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
KRT23-204ENST00000485751 ERICH3Q5RHP9 1530 aa28.1■■■□□ 2.09
KRT23-204ENST00000485751 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
KRT23-204ENST00000485751 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
KRT23-204ENST00000485751 IGF1RP08069 1367 aa28.04■■■□□ 2.08
KRT23-204ENST00000485751 SYNJ2O15056 1496 aa27.98■■■□□ 2.07
KRT23-204ENST00000485751 FBLN2P98095 1184 aa27.98■■■□□ 2.07
KRT23-204ENST00000485751 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
KRT23-204ENST00000485751 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
KRT23-204ENST00000485751 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
KRT23-204ENST00000485751 EEA1Q15075 1411 aa27.92■■■□□ 2.06
KRT23-204ENST00000485751 CUL7Q14999 1698 aa27.91■■■□□ 2.06
KRT23-204ENST00000485751 CHD1O14646 1710 aa27.9■■■□□ 2.06
KRT23-204ENST00000485751 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
KRT23-204ENST00000485751 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
KRT23-204ENST00000485751 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
KRT23-204ENST00000485751 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
KRT23-204ENST00000485751 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
KRT23-204ENST00000485751 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
KRT23-204ENST00000485751 RAPGEF2Q9Y4G8 1499 aa27.75■■■□□ 2.03
KRT23-204ENST00000485751 NUP160Q12769 1436 aa27.71■■■□□ 2.03
KRT23-204ENST00000485751 CEP170Q5SW79 1584 aa27.67■■■□□ 2.02
KRT23-204ENST00000485751 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
KRT23-204ENST00000485751 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
KRT23-204ENST00000485751 KIF21BO75037 1637 aa27.57■■■□□ 2
KRT23-204ENST00000485751 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms