RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 NISCHQ9Y2I1 1504 aa37.08■■■■□ 3.53
RPUSD3-217ENST00000485705 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
RPUSD3-217ENST00000485705 ABCC9O60706 1549 aa31.85■■■□□ 2.69
RPUSD3-217ENST00000485705 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.55
RPUSD3-217ENST00000485705 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
RPUSD3-217ENST00000485705 NACADO15069 1562 aa30.75■■■□□ 2.51
RPUSD3-217ENST00000485705 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
RPUSD3-217ENST00000485705 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
RPUSD3-217ENST00000485705 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
RPUSD3-217ENST00000485705 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
RPUSD3-217ENST00000485705 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
RPUSD3-217ENST00000485705 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
RPUSD3-217ENST00000485705 BICRAQ9NZM4 1560 aa29.84■■■□□ 2.37
RPUSD3-217ENST00000485705 SHROOM4Q9ULL8 1493 aa29.58■■■□□ 2.33
RPUSD3-217ENST00000485705 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
RPUSD3-217ENST00000485705 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
RPUSD3-217ENST00000485705 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
RPUSD3-217ENST00000485705 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
RPUSD3-217ENST00000485705 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
RPUSD3-217ENST00000485705 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
RPUSD3-217ENST00000485705 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
RPUSD3-217ENST00000485705 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
RPUSD3-217ENST00000485705 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
RPUSD3-217ENST00000485705 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
RPUSD3-217ENST00000485705 PEG3Q9GZU2 1588 aa28.39■■■□□ 2.14
RPUSD3-217ENST00000485705 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
RPUSD3-217ENST00000485705 WIZO95785 1651 aa28.35■■■□□ 2.13
RPUSD3-217ENST00000485705 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
RPUSD3-217ENST00000485705 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
RPUSD3-217ENST00000485705 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
RPUSD3-217ENST00000485705 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
RPUSD3-217ENST00000485705 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
RPUSD3-217ENST00000485705 NESP48681 1621 aa27.68■■■□□ 2.02
RPUSD3-217ENST00000485705 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
RPUSD3-217ENST00000485705 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
RPUSD3-217ENST00000485705 CFTRP13569 1480 aa27.48■■□□□ 1.99
RPUSD3-217ENST00000485705 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
RPUSD3-217ENST00000485705 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
RPUSD3-217ENST00000485705 KIF21AQ7Z4S6 1674 aa27.35■■□□□ 1.97
RPUSD3-217ENST00000485705 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
RPUSD3-217ENST00000485705 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
RPUSD3-217ENST00000485705 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
RPUSD3-217ENST00000485705 DNAJC5Q9H3Z4 198 aa27.15■■□□□ 1.94
RPUSD3-217ENST00000485705 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.94
RPUSD3-217ENST00000485705 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
RPUSD3-217ENST00000485705 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.91
RPUSD3-217ENST00000485705 WDR62O43379 1518 aa27■■□□□ 1.91
RPUSD3-217ENST00000485705 CUX2O14529 1486 aa26.93■■□□□ 1.9
RPUSD3-217ENST00000485705 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
RPUSD3-217ENST00000485705 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
RPUSD3-217ENST00000485705 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
RPUSD3-217ENST00000485705 CUX1P39880 1505 aa26.83■■□□□ 1.89
RPUSD3-217ENST00000485705 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
RPUSD3-217ENST00000485705 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
RPUSD3-217ENST00000485705 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
RPUSD3-217ENST00000485705 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
RPUSD3-217ENST00000485705 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
RPUSD3-217ENST00000485705 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
RPUSD3-217ENST00000485705 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
RPUSD3-217ENST00000485705 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
RPUSD3-217ENST00000485705 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
RPUSD3-217ENST00000485705 SOGA1O94964 1423 aa26.57■■□□□ 1.84
RPUSD3-217ENST00000485705 ZNF608Q9ULD9 1512 aaPredicted RBP26.52■■□□□ 1.84
RPUSD3-217ENST00000485705 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
RPUSD3-217ENST00000485705 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
RPUSD3-217ENST00000485705 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.823e-6■■□□□ 13.8
RPUSD3-217ENST00000485705 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
RPUSD3-217ENST00000485705 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
RPUSD3-217ENST00000485705 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
RPUSD3-217ENST00000485705 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
RPUSD3-217ENST00000485705 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
RPUSD3-217ENST00000485705 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
RPUSD3-217ENST00000485705 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
RPUSD3-217ENST00000485705 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
RPUSD3-217ENST00000485705 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
RPUSD3-217ENST00000485705 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
RPUSD3-217ENST00000485705 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
RPUSD3-217ENST00000485705 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
RPUSD3-217ENST00000485705 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
RPUSD3-217ENST00000485705 CHD1O14646 1710 aa26.04■■□□□ 1.76
RPUSD3-217ENST00000485705 IGF1RP08069 1367 aa26.04■■□□□ 1.76
RPUSD3-217ENST00000485705 FBLN2P98095 1184 aa26.02■■□□□ 1.76
RPUSD3-217ENST00000485705 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
RPUSD3-217ENST00000485705 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
RPUSD3-217ENST00000485705 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
RPUSD3-217ENST00000485705 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
RPUSD3-217ENST00000485705 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
RPUSD3-217ENST00000485705 CUL7Q14999 1698 aa25.9■■□□□ 1.74
RPUSD3-217ENST00000485705 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
RPUSD3-217ENST00000485705 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
RPUSD3-217ENST00000485705 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
RPUSD3-217ENST00000485705 EEA1Q15075 1411 aa25.81■■□□□ 1.72
RPUSD3-217ENST00000485705 CSRNP3Q8WYN3 585 aa25.81■■□□□ 1.72
RPUSD3-217ENST00000485705 CEP170Q5SW79 1584 aa25.77■■□□□ 1.72
RPUSD3-217ENST00000485705 NUP160Q12769 1436 aa25.75■■□□□ 1.71
RPUSD3-217ENST00000485705 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
RPUSD3-217ENST00000485705 RAPGEF2Q9Y4G8 1499 aa25.73■■□□□ 1.71
RPUSD3-217ENST00000485705 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
RPUSD3-217ENST00000485705 KIF21BO75037 1637 aa25.58■■□□□ 1.69
RPUSD3-217ENST00000485705 KIAA0586Q9BVV6 1533 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms