RNA–Protein interactions for RNA: ENST00000485570.1

ABLIM1-213, Transcript of actin binding LIM protein 1, humanhuman

TSL 5

Gene ABLIM1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM1-213ENST00000485570 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
ABLIM1-213ENST00000485570 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
ABLIM1-213ENST00000485570 ABCC9O60706 1549 aa27.86■■■□□ 2.05
ABLIM1-213ENST00000485570 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
ABLIM1-213ENST00000485570 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
ABLIM1-213ENST00000485570 NACADO15069 1562 aa26.97■■□□□ 1.91
ABLIM1-213ENST00000485570 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
ABLIM1-213ENST00000485570 RB1CC1Q8TDY2 1594 aa26.9■■□□□ 1.9
ABLIM1-213ENST00000485570 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
ABLIM1-213ENST00000485570 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.79
ABLIM1-213ENST00000485570 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
ABLIM1-213ENST00000485570 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
ABLIM1-213ENST00000485570 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
ABLIM1-213ENST00000485570 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
ABLIM1-213ENST00000485570 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
ABLIM1-213ENST00000485570 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
ABLIM1-213ENST00000485570 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
ABLIM1-213ENST00000485570 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
ABLIM1-213ENST00000485570 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
ABLIM1-213ENST00000485570 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
ABLIM1-213ENST00000485570 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
ABLIM1-213ENST00000485570 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
ABLIM1-213ENST00000485570 NCAPD3P42695 1498 aa24.94■■□□□ 1.58
ABLIM1-213ENST00000485570 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
ABLIM1-213ENST00000485570 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
ABLIM1-213ENST00000485570 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
ABLIM1-213ENST00000485570 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
ABLIM1-213ENST00000485570 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
ABLIM1-213ENST00000485570 WIZO95785 1651 aa24.67■■□□□ 1.54
ABLIM1-213ENST00000485570 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
ABLIM1-213ENST00000485570 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
ABLIM1-213ENST00000485570 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
ABLIM1-213ENST00000485570 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
ABLIM1-213ENST00000485570 NESP48681 1621 aa24.18■■□□□ 1.46
ABLIM1-213ENST00000485570 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
ABLIM1-213ENST00000485570 CFTRP13569 1480 aa24.1■■□□□ 1.45
ABLIM1-213ENST00000485570 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
ABLIM1-213ENST00000485570 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
ABLIM1-213ENST00000485570 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
ABLIM1-213ENST00000485570 KIF21AQ7Z4S6 1674 aa23.82■■□□□ 1.4
ABLIM1-213ENST00000485570 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
ABLIM1-213ENST00000485570 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
ABLIM1-213ENST00000485570 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
ABLIM1-213ENST00000485570 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
ABLIM1-213ENST00000485570 CUX2O14529 1486 aa23.69■■□□□ 1.38
ABLIM1-213ENST00000485570 WDR62O43379 1518 aa23.64■■□□□ 1.37
ABLIM1-213ENST00000485570 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
ABLIM1-213ENST00000485570 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
ABLIM1-213ENST00000485570 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
ABLIM1-213ENST00000485570 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
ABLIM1-213ENST00000485570 CUX1P39880 1505 aa23.41■■□□□ 1.34
ABLIM1-213ENST00000485570 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
ABLIM1-213ENST00000485570 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
ABLIM1-213ENST00000485570 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
ABLIM1-213ENST00000485570 SOGA1O94964 1423 aa23.3■■□□□ 1.32
ABLIM1-213ENST00000485570 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
ABLIM1-213ENST00000485570 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
ABLIM1-213ENST00000485570 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
ABLIM1-213ENST00000485570 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
ABLIM1-213ENST00000485570 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
ABLIM1-213ENST00000485570 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
ABLIM1-213ENST00000485570 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
ABLIM1-213ENST00000485570 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
ABLIM1-213ENST00000485570 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
ABLIM1-213ENST00000485570 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
ABLIM1-213ENST00000485570 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
ABLIM1-213ENST00000485570 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
ABLIM1-213ENST00000485570 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
ABLIM1-213ENST00000485570 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
ABLIM1-213ENST00000485570 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
ABLIM1-213ENST00000485570 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
ABLIM1-213ENST00000485570 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
ABLIM1-213ENST00000485570 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
ABLIM1-213ENST00000485570 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
ABLIM1-213ENST00000485570 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
ABLIM1-213ENST00000485570 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
ABLIM1-213ENST00000485570 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
ABLIM1-213ENST00000485570 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
ABLIM1-213ENST00000485570 IGF1RP08069 1367 aa22.83■■□□□ 1.25
ABLIM1-213ENST00000485570 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
ABLIM1-213ENST00000485570 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
ABLIM1-213ENST00000485570 FBLN2P98095 1184 aa22.79■■□□□ 1.24
ABLIM1-213ENST00000485570 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
ABLIM1-213ENST00000485570 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
ABLIM1-213ENST00000485570 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
ABLIM1-213ENST00000485570 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
ABLIM1-213ENST00000485570 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
ABLIM1-213ENST00000485570 CHD1O14646 1710 aa22.66■■□□□ 1.22
ABLIM1-213ENST00000485570 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
ABLIM1-213ENST00000485570 EEA1Q15075 1411 aa22.6■■□□□ 1.21
ABLIM1-213ENST00000485570 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
ABLIM1-213ENST00000485570 CUL7Q14999 1698 aa22.6■■□□□ 1.21
ABLIM1-213ENST00000485570 NUP160Q12769 1436 aa22.57■■□□□ 1.2
ABLIM1-213ENST00000485570 PRXQ9BXM0 1461 aa22.51■■□□□ 1.19
ABLIM1-213ENST00000485570 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
ABLIM1-213ENST00000485570 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
ABLIM1-213ENST00000485570 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
ABLIM1-213ENST00000485570 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
ABLIM1-213ENST00000485570 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
ABLIM1-213ENST00000485570 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms