RNA–Protein interactions for RNA: ENST00000485341.5

LSP1-216, Transcript of lymphocyte specific protein 1, humanhuman

TSL 2

Gene LSP1, Length 2,024 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-216ENST00000485341 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
LSP1-216ENST00000485341 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
LSP1-216ENST00000485341 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
LSP1-216ENST00000485341 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
LSP1-216ENST00000485341 ABCC9O60706 1549 aa28.56■■■□□ 2.16
LSP1-216ENST00000485341 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
LSP1-216ENST00000485341 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
LSP1-216ENST00000485341 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
LSP1-216ENST00000485341 NACADO15069 1562 aa27.91■■■□□ 2.06
LSP1-216ENST00000485341 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.02
LSP1-216ENST00000485341 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
LSP1-216ENST00000485341 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
LSP1-216ENST00000485341 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.93
LSP1-216ENST00000485341 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
LSP1-216ENST00000485341 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
LSP1-216ENST00000485341 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
LSP1-216ENST00000485341 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
LSP1-216ENST00000485341 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.86
LSP1-216ENST00000485341 BAZ1AQ9NRL2 1556 aaPredicted RBP26.52■■□□□ 1.84
LSP1-216ENST00000485341 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
LSP1-216ENST00000485341 WIZO95785 1651 aa26.41■■□□□ 1.82
LSP1-216ENST00000485341 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
LSP1-216ENST00000485341 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
LSP1-216ENST00000485341 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
LSP1-216ENST00000485341 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
LSP1-216ENST00000485341 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
LSP1-216ENST00000485341 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
LSP1-216ENST00000485341 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
LSP1-216ENST00000485341 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
LSP1-216ENST00000485341 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
LSP1-216ENST00000485341 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
LSP1-216ENST00000485341 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
LSP1-216ENST00000485341 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
LSP1-216ENST00000485341 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
LSP1-216ENST00000485341 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
LSP1-216ENST00000485341 CFTRP13569 1480 aa25.24■■□□□ 1.63
LSP1-216ENST00000485341 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.62
LSP1-216ENST00000485341 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
LSP1-216ENST00000485341 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
LSP1-216ENST00000485341 NESP48681 1621 aa25.07■■□□□ 1.6
LSP1-216ENST00000485341 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
LSP1-216ENST00000485341 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
LSP1-216ENST00000485341 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
LSP1-216ENST00000485341 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
LSP1-216ENST00000485341 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
LSP1-216ENST00000485341 CUX1P39880 1505 aa24.89■■□□□ 1.58
LSP1-216ENST00000485341 SOGA1O94964 1423 aa24.89■■□□□ 1.57
LSP1-216ENST00000485341 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
LSP1-216ENST00000485341 EHMT2Q96KQ7 1210 aa24.83■■□□□ 1.56
LSP1-216ENST00000485341 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.56
LSP1-216ENST00000485341 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
LSP1-216ENST00000485341 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
LSP1-216ENST00000485341 CEP164Q9UPV0 1460 aa24.73■■□□□ 1.55
LSP1-216ENST00000485341 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
LSP1-216ENST00000485341 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
LSP1-216ENST00000485341 PCGF6Q9BYE7 350 aa24.66■■□□□ 1.54
LSP1-216ENST00000485341 EEA1Q15075 1411 aa24.64■■□□□ 1.53
LSP1-216ENST00000485341 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
LSP1-216ENST00000485341 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
LSP1-216ENST00000485341 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
LSP1-216ENST00000485341 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
LSP1-216ENST00000485341 HRCP23327 699 aa24.54■■□□□ 1.52
LSP1-216ENST00000485341 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
LSP1-216ENST00000485341 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
LSP1-216ENST00000485341 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
LSP1-216ENST00000485341 CUX2O14529 1486 aa24.48■■□□□ 1.51
LSP1-216ENST00000485341 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
LSP1-216ENST00000485341 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
LSP1-216ENST00000485341 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
LSP1-216ENST00000485341 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.5
LSP1-216ENST00000485341 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
LSP1-216ENST00000485341 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
LSP1-216ENST00000485341 RAPGEF2Q9Y4G8 1499 aa24.34■■□□□ 1.49
LSP1-216ENST00000485341 KIF21BO75037 1637 aa24.34■■□□□ 1.49
LSP1-216ENST00000485341 IGF1RP08069 1367 aa24.34■■□□□ 1.49
LSP1-216ENST00000485341 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
LSP1-216ENST00000485341 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
LSP1-216ENST00000485341 TNIKQ9UKE5 1360 aa24.3■■□□□ 1.48
LSP1-216ENST00000485341 WDR62O43379 1518 aa24.3■■□□□ 1.48
LSP1-216ENST00000485341 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
LSP1-216ENST00000485341 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
LSP1-216ENST00000485341 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
LSP1-216ENST00000485341 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
LSP1-216ENST00000485341 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
LSP1-216ENST00000485341 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
LSP1-216ENST00000485341 GAPVD1Q14C86 1478 aa24.16■■□□□ 1.46
LSP1-216ENST00000485341 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
LSP1-216ENST00000485341 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
LSP1-216ENST00000485341 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.45
LSP1-216ENST00000485341 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
LSP1-216ENST00000485341 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
LSP1-216ENST00000485341 CLIP1P30622 1438 aa24.02■■□□□ 1.44
LSP1-216ENST00000485341 CUL7Q14999 1698 aa24■■□□□ 1.43
LSP1-216ENST00000485341 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
LSP1-216ENST00000485341 GRIN2BQ13224 1484 aa23.95■■□□□ 1.42
LSP1-216ENST00000485341 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
LSP1-216ENST00000485341 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.42
LSP1-216ENST00000485341 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
LSP1-216ENST00000485341 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
LSP1-216ENST00000485341 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms