RNA–Protein interactions for RNA: ENST00000485075.1

DNAJA4-209, Transcript of DnaJ heat shock protein family (Hsp40) member A4, humanhuman

TSL 1 (best)

Gene DNAJA4, Length 2,006 nt, Biotype retained intron, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJA4-209ENST00000485075 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
DNAJA4-209ENST00000485075 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
DNAJA4-209ENST00000485075 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
DNAJA4-209ENST00000485075 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
DNAJA4-209ENST00000485075 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
DNAJA4-209ENST00000485075 ABCC9O60706 1549 aa26.2■■□□□ 1.78
DNAJA4-209ENST00000485075 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
DNAJA4-209ENST00000485075 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
DNAJA4-209ENST00000485075 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
DNAJA4-209ENST00000485075 NACADO15069 1562 aa25.8■■□□□ 1.72
DNAJA4-209ENST00000485075 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
DNAJA4-209ENST00000485075 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
DNAJA4-209ENST00000485075 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
DNAJA4-209ENST00000485075 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
DNAJA4-209ENST00000485075 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
DNAJA4-209ENST00000485075 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
DNAJA4-209ENST00000485075 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
DNAJA4-209ENST00000485075 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
DNAJA4-209ENST00000485075 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
DNAJA4-209ENST00000485075 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
DNAJA4-209ENST00000485075 WIZO95785 1651 aa24.43■■□□□ 1.5
DNAJA4-209ENST00000485075 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
DNAJA4-209ENST00000485075 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
DNAJA4-209ENST00000485075 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
DNAJA4-209ENST00000485075 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
DNAJA4-209ENST00000485075 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
DNAJA4-209ENST00000485075 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
DNAJA4-209ENST00000485075 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
DNAJA4-209ENST00000485075 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
DNAJA4-209ENST00000485075 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
DNAJA4-209ENST00000485075 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
DNAJA4-209ENST00000485075 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
DNAJA4-209ENST00000485075 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
DNAJA4-209ENST00000485075 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
DNAJA4-209ENST00000485075 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
DNAJA4-209ENST00000485075 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
DNAJA4-209ENST00000485075 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
DNAJA4-209ENST00000485075 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
DNAJA4-209ENST00000485075 HRCP23327 699 aa23.67■■□□□ 1.38
DNAJA4-209ENST00000485075 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
DNAJA4-209ENST00000485075 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
DNAJA4-209ENST00000485075 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
DNAJA4-209ENST00000485075 SOGA1O94964 1423 aa23.43■■□□□ 1.34
DNAJA4-209ENST00000485075 EEA1Q15075 1411 aa23.42■■□□□ 1.34
DNAJA4-209ENST00000485075 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
DNAJA4-209ENST00000485075 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
DNAJA4-209ENST00000485075 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
DNAJA4-209ENST00000485075 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
DNAJA4-209ENST00000485075 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
DNAJA4-209ENST00000485075 CFTRP13569 1480 aa23.2■■□□□ 1.3
DNAJA4-209ENST00000485075 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
DNAJA4-209ENST00000485075 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
DNAJA4-209ENST00000485075 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
DNAJA4-209ENST00000485075 TOP2BQ02880 1626 aa23.13■■□□□ 1.29
DNAJA4-209ENST00000485075 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
DNAJA4-209ENST00000485075 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
DNAJA4-209ENST00000485075 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.28
DNAJA4-209ENST00000485075 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
DNAJA4-209ENST00000485075 KIF21BO75037 1637 aa23.07■■□□□ 1.28
DNAJA4-209ENST00000485075 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
DNAJA4-209ENST00000485075 ZEB1P37275 1124 aaPredicted RBP23.01■■□□□ 1.27
DNAJA4-209ENST00000485075 NESP48681 1621 aa22.96■■□□□ 1.27
DNAJA4-209ENST00000485075 CUX1P39880 1505 aa22.94■■□□□ 1.26
DNAJA4-209ENST00000485075 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.26
DNAJA4-209ENST00000485075 FANCD2Q9BXW9 1451 aa22.87■■□□□ 1.25
DNAJA4-209ENST00000485075 CLIP1P30622 1438 aa22.84■■□□□ 1.25
DNAJA4-209ENST00000485075 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
DNAJA4-209ENST00000485075 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
DNAJA4-209ENST00000485075 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
DNAJA4-209ENST00000485075 KIF27Q86VH2 1401 aa22.79■■□□□ 1.24
DNAJA4-209ENST00000485075 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
DNAJA4-209ENST00000485075 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
DNAJA4-209ENST00000485075 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
DNAJA4-209ENST00000485075 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
DNAJA4-209ENST00000485075 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
DNAJA4-209ENST00000485075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
DNAJA4-209ENST00000485075 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
DNAJA4-209ENST00000485075 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
DNAJA4-209ENST00000485075 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
DNAJA4-209ENST00000485075 APLP2Q06481 763 aa22.6■■□□□ 1.21
DNAJA4-209ENST00000485075 CUX2O14529 1486 aa22.59■■□□□ 1.21
DNAJA4-209ENST00000485075 FGD5Q6ZNL6 1462 aa22.59■■□□□ 1.21
DNAJA4-209ENST00000485075 IGF1RP08069 1367 aa22.57■■□□□ 1.2
DNAJA4-209ENST00000485075 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
DNAJA4-209ENST00000485075 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
DNAJA4-209ENST00000485075 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
DNAJA4-209ENST00000485075 ERCC6Q03468 1493 aa22.49■■□□□ 1.19
DNAJA4-209ENST00000485075 WDR62O43379 1518 aa22.46■■□□□ 1.19
DNAJA4-209ENST00000485075 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
DNAJA4-209ENST00000485075 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
DNAJA4-209ENST00000485075 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
DNAJA4-209ENST00000485075 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
DNAJA4-209ENST00000485075 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
DNAJA4-209ENST00000485075 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
DNAJA4-209ENST00000485075 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
DNAJA4-209ENST00000485075 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
DNAJA4-209ENST00000485075 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
DNAJA4-209ENST00000485075 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.15
DNAJA4-209ENST00000485075 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
DNAJA4-209ENST00000485075 CUL7Q14999 1698 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms