RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
TRUB1-202ENST00000485065 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
TRUB1-202ENST00000485065 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
TRUB1-202ENST00000485065 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
TRUB1-202ENST00000485065 PHF23Q9BUL5 403 aaPredicted RBP24.71■■□□□ 1.55
TRUB1-202ENST00000485065 FOXD1Q16676 465 aa23.47■■□□□ 1.35
TRUB1-202ENST00000485065 ABCC9O60706 1549 aa23.37■■□□□ 1.33
TRUB1-202ENST00000485065 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
TRUB1-202ENST00000485065 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
TRUB1-202ENST00000485065 POTEDQ86YR6 584 aa22.16■■□□□ 1.14
TRUB1-202ENST00000485065 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
TRUB1-202ENST00000485065 MSH5O43196 834 aa22.02■■□□□ 1.12
TRUB1-202ENST00000485065 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
TRUB1-202ENST00000485065 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
TRUB1-202ENST00000485065 NACADO15069 1562 aa21.77■■□□□ 1.08
TRUB1-202ENST00000485065 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
TRUB1-202ENST00000485065 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
TRUB1-202ENST00000485065 ADRA2BP18089 450 aa21.57■■□□□ 1.04
TRUB1-202ENST00000485065 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
TRUB1-202ENST00000485065 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
TRUB1-202ENST00000485065 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
TRUB1-202ENST00000485065 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
TRUB1-202ENST00000485065 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
TRUB1-202ENST00000485065 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
TRUB1-202ENST00000485065 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
TRUB1-202ENST00000485065 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
TRUB1-202ENST00000485065 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
TRUB1-202ENST00000485065 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
TRUB1-202ENST00000485065 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TRUB1-202ENST00000485065 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
TRUB1-202ENST00000485065 CUX2O14529 1486 aa20.51■□□□□ 0.87
TRUB1-202ENST00000485065 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
TRUB1-202ENST00000485065 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
TRUB1-202ENST00000485065 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
TRUB1-202ENST00000485065 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
TRUB1-202ENST00000485065 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
TRUB1-202ENST00000485065 NESP48681 1621 aa19.88■□□□□ 0.77
TRUB1-202ENST00000485065 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
TRUB1-202ENST00000485065 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
TRUB1-202ENST00000485065 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
TRUB1-202ENST00000485065 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
TRUB1-202ENST00000485065 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
TRUB1-202ENST00000485065 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
TRUB1-202ENST00000485065 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
TRUB1-202ENST00000485065 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
TRUB1-202ENST00000485065 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
TRUB1-202ENST00000485065 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
TRUB1-202ENST00000485065 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
TRUB1-202ENST00000485065 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
TRUB1-202ENST00000485065 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
TRUB1-202ENST00000485065 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
TRUB1-202ENST00000485065 WDR62O43379 1518 aa19.46■□□□□ 0.71
TRUB1-202ENST00000485065 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
TRUB1-202ENST00000485065 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
TRUB1-202ENST00000485065 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
TRUB1-202ENST00000485065 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
TRUB1-202ENST00000485065 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
TRUB1-202ENST00000485065 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
TRUB1-202ENST00000485065 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
TRUB1-202ENST00000485065 CFTRP13569 1480 aa19.1■□□□□ 0.65
TRUB1-202ENST00000485065 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
TRUB1-202ENST00000485065 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
TRUB1-202ENST00000485065 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
TRUB1-202ENST00000485065 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
TRUB1-202ENST00000485065 WIZO95785 1651 aa19.01■□□□□ 0.63
TRUB1-202ENST00000485065 HOXD11P31277 338 aaPredicted RBP19■□□□□ 0.63
TRUB1-202ENST00000485065 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
TRUB1-202ENST00000485065 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
TRUB1-202ENST00000485065 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
TRUB1-202ENST00000485065 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
TRUB1-202ENST00000485065 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
TRUB1-202ENST00000485065 ARAP1Q96P48 1450 aa18.86■□□□□ 0.61
TRUB1-202ENST00000485065 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
TRUB1-202ENST00000485065 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
TRUB1-202ENST00000485065 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
TRUB1-202ENST00000485065 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
TRUB1-202ENST00000485065 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
TRUB1-202ENST00000485065 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
TRUB1-202ENST00000485065 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
TRUB1-202ENST00000485065 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
TRUB1-202ENST00000485065 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
TRUB1-202ENST00000485065 CHD1O14646 1710 aa18.72■□□□□ 0.59
TRUB1-202ENST00000485065 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRUB1-202ENST00000485065 FBLN2P98095 1184 aa18.65■□□□□ 0.58
TRUB1-202ENST00000485065 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
TRUB1-202ENST00000485065 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
TRUB1-202ENST00000485065 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
TRUB1-202ENST00000485065 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
TRUB1-202ENST00000485065 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.55
TRUB1-202ENST00000485065 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
TRUB1-202ENST00000485065 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
TRUB1-202ENST00000485065 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
TRUB1-202ENST00000485065 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
TRUB1-202ENST00000485065 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.54
TRUB1-202ENST00000485065 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
TRUB1-202ENST00000485065 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
TRUB1-202ENST00000485065 SOGA1O94964 1423 aa18.44■□□□□ 0.54
TRUB1-202ENST00000485065 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
TRUB1-202ENST00000485065 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
TRUB1-202ENST00000485065 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms