RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 NISCHQ9Y2I1 1504 aa12.45□□□□□ -0.42
CNTN4-216ENST00000484686 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
CNTN4-216ENST00000484686 ABCC9O60706 1549 aa10.7□□□□□ -0.7
CNTN4-216ENST00000484686 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
CNTN4-216ENST00000484686 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
CNTN4-216ENST00000484686 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
CNTN4-216ENST00000484686 NACADO15069 1562 aa10.22□□□□□ -0.77
CNTN4-216ENST00000484686 RB1CC1Q8TDY2 1594 aa10.22□□□□□ -0.77
CNTN4-216ENST00000484686 CHIC1Q5VXU3 224 aa10.22□□□□□ -0.77
CNTN4-216ENST00000484686 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
CNTN4-216ENST00000484686 DCAF1Q9Y4B6 1507 aa10.19□□□□□ -0.78
CNTN4-216ENST00000484686 MYO15BQ96JP2 1530 aa10.15□□□□□ -0.79
CNTN4-216ENST00000484686 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
CNTN4-216ENST00000484686 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
CNTN4-216ENST00000484686 UNC13AQ9UPW8 1703 aa9.99□□□□□ -0.81
CNTN4-216ENST00000484686 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
CNTN4-216ENST00000484686 CECR2Q9BXF3 1484 aa9.77□□□□□ -0.85
CNTN4-216ENST00000484686 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
CNTN4-216ENST00000484686 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
CNTN4-216ENST00000484686 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
CNTN4-216ENST00000484686 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.86
CNTN4-216ENST00000484686 BAZ1AQ9NRL2 1556 aaPredicted RBP9.61□□□□□ -0.87
CNTN4-216ENST00000484686 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
CNTN4-216ENST00000484686 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
CNTN4-216ENST00000484686 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
CNTN4-216ENST00000484686 WIZO95785 1651 aa9.55□□□□□ -0.88
CNTN4-216ENST00000484686 ATAD2BQ9ULI0 1458 aa9.54□□□□□ -0.88
CNTN4-216ENST00000484686 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
CNTN4-216ENST00000484686 SMARCA2P51531 1590 aa9.49□□□□□ -0.89
CNTN4-216ENST00000484686 NCAPD3P42695 1498 aa9.48□□□□□ -0.89
CNTN4-216ENST00000484686 PEG3Q9GZU2 1588 aa9.44□□□□□ -0.9
CNTN4-216ENST00000484686 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
CNTN4-216ENST00000484686 TOP2AP11388 1531 aaKnown RBP9.38□□□□□ -0.91
CNTN4-216ENST00000484686 SENP3Q9H4L4 574 aaPredicted RBP9.36□□□□□ -0.91
CNTN4-216ENST00000484686 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
CNTN4-216ENST00000484686 NESP48681 1621 aa9.32□□□□□ -0.92
CNTN4-216ENST00000484686 CADPSQ9ULU8 1353 aa9.27□□□□□ -0.93
CNTN4-216ENST00000484686 CFTRP13569 1480 aa9.21□□□□□ -0.93
CNTN4-216ENST00000484686 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
CNTN4-216ENST00000484686 LAMC3Q9Y6N6 1575 aa9.17□□□□□ -0.94
CNTN4-216ENST00000484686 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
CNTN4-216ENST00000484686 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
CNTN4-216ENST00000484686 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
CNTN4-216ENST00000484686 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
CNTN4-216ENST00000484686 KIF21AQ7Z4S6 1674 aa9.11□□□□□ -0.95
CNTN4-216ENST00000484686 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
CNTN4-216ENST00000484686 WRNQ14191 1432 aaPredicted RBP eCLIP9.06□□□□□ -0.96
CNTN4-216ENST00000484686 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
CNTN4-216ENST00000484686 MRC2Q9UBG0 1479 aa9.04□□□□□ -0.96
CNTN4-216ENST00000484686 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
CNTN4-216ENST00000484686 CUX1P39880 1505 aa9.02□□□□□ -0.97
CNTN4-216ENST00000484686 TOPBP1Q92547 1522 aa9.01□□□□□ -0.97
CNTN4-216ENST00000484686 SYNJ1O43426 1573 aa9□□□□□ -0.97
CNTN4-216ENST00000484686 FAM9AQ8IZU1 332 aaPredicted RBP9□□□□□ -0.97
CNTN4-216ENST00000484686 THOC2Q8NI27 1593 aaKnown RBP9□□□□□ -0.97
CNTN4-216ENST00000484686 RAD54L2Q9Y4B4 1467 aa8.99□□□□□ -0.97
CNTN4-216ENST00000484686 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
CNTN4-216ENST00000484686 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
CNTN4-216ENST00000484686 WDR62O43379 1518 aa8.97□□□□□ -0.97
CNTN4-216ENST00000484686 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
CNTN4-216ENST00000484686 EHMT2Q96KQ7 1210 aa8.96□□□□□ -0.97
CNTN4-216ENST00000484686 SOGA1O94964 1423 aa8.96□□□□□ -0.97
CNTN4-216ENST00000484686 TDRD9Q8NDG6 1382 aaKnown RBP8.96□□□□□ -0.98
CNTN4-216ENST00000484686 CUX2O14529 1486 aa8.95□□□□□ -0.98
CNTN4-216ENST00000484686 TOP2BQ02880 1626 aa8.94□□□□□ -0.98
CNTN4-216ENST00000484686 AQRO60306 1485 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNTN4-216ENST00000484686 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
CNTN4-216ENST00000484686 RUSC2Q8N2Y8 1516 aa8.9□□□□□ -0.98
CNTN4-216ENST00000484686 BIVM-ERCC5R4GMW8 1640 aa8.9□□□□□ -0.99
CNTN4-216ENST00000484686 FBLN2P98095 1184 aa8.89□□□□□ -0.99
CNTN4-216ENST00000484686 IFT140Q96RY7 1462 aa8.88□□□□□ -0.99
CNTN4-216ENST00000484686 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
CNTN4-216ENST00000484686 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
CNTN4-216ENST00000484686 ABCA10Q8WWZ4 1543 aa8.84□□□□□ -0.99
CNTN4-216ENST00000484686 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
CNTN4-216ENST00000484686 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
CNTN4-216ENST00000484686 CSRNP3Q8WYN3 585 aa8.82□□□□□ -1
CNTN4-216ENST00000484686 EIF4G3O43432 1585 aaKnown RBP8.81□□□□□ -1
CNTN4-216ENST00000484686 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
CNTN4-216ENST00000484686 IGF1RP08069 1367 aa8.81□□□□□ -1
CNTN4-216ENST00000484686 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
CNTN4-216ENST00000484686 RANGAP1P46060 587 aaPredicted RBP8.8□□□□□ -1
CNTN4-216ENST00000484686 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
CNTN4-216ENST00000484686 GRIN2BQ13224 1484 aa8.78□□□□□ -1
CNTN4-216ENST00000484686 WDR97A6NE52 1622 aa8.78□□□□□ -1
CNTN4-216ENST00000484686 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
CNTN4-216ENST00000484686 CARMIL1Q5VZK9 1371 aa8.77□□□□□ -1.01
CNTN4-216ENST00000484686 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
CNTN4-216ENST00000484686 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
CNTN4-216ENST00000484686 PBRM1Q86U86 1689 aa8.73□□□□□ -1.01
CNTN4-216ENST00000484686 ERICH3Q5RHP9 1530 aa8.72□□□□□ -1.01
CNTN4-216ENST00000484686 RAPGEF2Q9Y4G8 1499 aa8.72□□□□□ -1.01
CNTN4-216ENST00000484686 OSCARQ8IYS5 282 aa8.72□□□□□ -1.01
CNTN4-216ENST00000484686 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.01
CNTN4-216ENST00000484686 EEA1Q15075 1411 aa8.71□□□□□ -1.01
CNTN4-216ENST00000484686 MAGI1Q96QZ7 1491 aaPredicted RBP8.71□□□□□ -1.02
CNTN4-216ENST00000484686 TTBK1Q5TCY1 1321 aaPredicted RBP8.71□□□□□ -1.02
CNTN4-216ENST00000484686 SYNJ2O15056 1496 aa8.7□□□□□ -1.02
CNTN4-216ENST00000484686 PRXQ9BXM0 1461 aa8.68□□□□□ -1.02
CNTN4-216ENST00000484686 GRIN2AQ12879 1464 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms