RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
CDK13-205ENST00000484589 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
CDK13-205ENST00000484589 ABCC9O60706 1549 aa17.14■□□□□ 0.33
CDK13-205ENST00000484589 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
CDK13-205ENST00000484589 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
CDK13-205ENST00000484589 DCAF1Q9Y4B6 1507 aa16.56■□□□□ 0.24
CDK13-205ENST00000484589 NACADO15069 1562 aa16.54■□□□□ 0.24
CDK13-205ENST00000484589 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
CDK13-205ENST00000484589 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
CDK13-205ENST00000484589 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
CDK13-205ENST00000484589 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
CDK13-205ENST00000484589 SHROOM4Q9ULL8 1493 aa16.21■□□□□ 0.19
CDK13-205ENST00000484589 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK13-205ENST00000484589 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
CDK13-205ENST00000484589 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
CDK13-205ENST00000484589 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
CDK13-205ENST00000484589 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
CDK13-205ENST00000484589 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
CDK13-205ENST00000484589 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
CDK13-205ENST00000484589 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.08
CDK13-205ENST00000484589 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
CDK13-205ENST00000484589 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
CDK13-205ENST00000484589 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
CDK13-205ENST00000484589 WIZO95785 1651 aa15.4■□□□□ 0.06
CDK13-205ENST00000484589 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
CDK13-205ENST00000484589 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
CDK13-205ENST00000484589 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.05
CDK13-205ENST00000484589 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
CDK13-205ENST00000484589 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
CDK13-205ENST00000484589 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
CDK13-205ENST00000484589 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
CDK13-205ENST00000484589 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
CDK13-205ENST00000484589 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
CDK13-205ENST00000484589 NESP48681 1621 aa14.95□□□□□ -0.02
CDK13-205ENST00000484589 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
CDK13-205ENST00000484589 CFTRP13569 1480 aa14.86□□□□□ -0.03
CDK13-205ENST00000484589 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
CDK13-205ENST00000484589 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.05
CDK13-205ENST00000484589 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
CDK13-205ENST00000484589 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
CDK13-205ENST00000484589 KIF21AQ7Z4S6 1674 aa14.72□□□□□ -0.05
CDK13-205ENST00000484589 PRDM2Q13029 1718 aa14.71□□□□□ -0.05
CDK13-205ENST00000484589 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
CDK13-205ENST00000484589 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
CDK13-205ENST00000484589 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
CDK13-205ENST00000484589 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
CDK13-205ENST00000484589 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
CDK13-205ENST00000484589 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
CDK13-205ENST00000484589 CUX1P39880 1505 aa14.55□□□□□ -0.08
CDK13-205ENST00000484589 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
CDK13-205ENST00000484589 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
CDK13-205ENST00000484589 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
CDK13-205ENST00000484589 WDR62O43379 1518 aa14.51□□□□□ -0.09
CDK13-205ENST00000484589 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
CDK13-205ENST00000484589 TOP2BQ02880 1626 aa14.46□□□□□ -0.09
CDK13-205ENST00000484589 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
CDK13-205ENST00000484589 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
CDK13-205ENST00000484589 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
CDK13-205ENST00000484589 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
CDK13-205ENST00000484589 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
CDK13-205ENST00000484589 CUX2O14529 1486 aa14.43□□□□□ -0.1
CDK13-205ENST00000484589 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
CDK13-205ENST00000484589 SOGA1O94964 1423 aa14.38□□□□□ -0.11
CDK13-205ENST00000484589 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
CDK13-205ENST00000484589 ZNF608Q9ULD9 1512 aaPredicted RBP14.33□□□□□ -0.12
CDK13-205ENST00000484589 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
CDK13-205ENST00000484589 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
CDK13-205ENST00000484589 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK13-205ENST00000484589 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
CDK13-205ENST00000484589 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
CDK13-205ENST00000484589 WDR97A6NE52 1622 aa14.27□□□□□ -0.13
CDK13-205ENST00000484589 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
CDK13-205ENST00000484589 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
CDK13-205ENST00000484589 GAPVD1Q14C86 1478 aa14.21□□□□□ -0.14
CDK13-205ENST00000484589 ABCA5Q8WWZ7 1642 aa14.2□□□□□ -0.14
CDK13-205ENST00000484589 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
CDK13-205ENST00000484589 IGF1RP08069 1367 aa14.17□□□□□ -0.14
CDK13-205ENST00000484589 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
CDK13-205ENST00000484589 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CDK13-205ENST00000484589 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
CDK13-205ENST00000484589 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
CDK13-205ENST00000484589 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
CDK13-205ENST00000484589 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
CDK13-205ENST00000484589 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.16
CDK13-205ENST00000484589 FBLN2P98095 1184 aa14.08□□□□□ -0.16
CDK13-205ENST00000484589 EEA1Q15075 1411 aa14.06□□□□□ -0.16
CDK13-205ENST00000484589 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
CDK13-205ENST00000484589 MAGI1Q96QZ7 1491 aaPredicted RBP14.05□□□□□ -0.16
CDK13-205ENST00000484589 ADAMTS12P58397 1594 aa14.04□□□□□ -0.16
CDK13-205ENST00000484589 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
CDK13-205ENST00000484589 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
CDK13-205ENST00000484589 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
CDK13-205ENST00000484589 SYNJ2O15056 1496 aa14.02□□□□□ -0.17
CDK13-205ENST00000484589 CUL7Q14999 1698 aa14.01□□□□□ -0.17
CDK13-205ENST00000484589 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
CDK13-205ENST00000484589 CHD1O14646 1710 aa14□□□□□ -0.17
CDK13-205ENST00000484589 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
CDK13-205ENST00000484589 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
CDK13-205ENST00000484589 KIF21BO75037 1637 aa13.93□□□□□ -0.18
CDK13-205ENST00000484589 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms