RNA–Protein interactions for RNA: ENST00000484370.5

FGFR1-221, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-221ENST00000484370 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.8
FGFR1-221ENST00000484370 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
FGFR1-221ENST00000484370 ABCC9O60706 1549 aa27.9■■■□□ 2.06
FGFR1-221ENST00000484370 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
FGFR1-221ENST00000484370 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
FGFR1-221ENST00000484370 NACADO15069 1562 aa26.96■■□□□ 1.91
FGFR1-221ENST00000484370 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
FGFR1-221ENST00000484370 DCAF1Q9Y4B6 1507 aa26.86■■□□□ 1.89
FGFR1-221ENST00000484370 MYO15BQ96JP2 1530 aa26.85■■□□□ 1.89
FGFR1-221ENST00000484370 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
FGFR1-221ENST00000484370 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
FGFR1-221ENST00000484370 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
FGFR1-221ENST00000484370 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
FGFR1-221ENST00000484370 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
FGFR1-221ENST00000484370 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
FGFR1-221ENST00000484370 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
FGFR1-221ENST00000484370 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
FGFR1-221ENST00000484370 CC2D2AQ9P2K1 1620 aa25.22■■□□□ 1.63
FGFR1-221ENST00000484370 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
FGFR1-221ENST00000484370 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
FGFR1-221ENST00000484370 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
FGFR1-221ENST00000484370 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
FGFR1-221ENST00000484370 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
FGFR1-221ENST00000484370 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
FGFR1-221ENST00000484370 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
FGFR1-221ENST00000484370 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
FGFR1-221ENST00000484370 WIZO95785 1651 aa24.84■■□□□ 1.57
FGFR1-221ENST00000484370 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
FGFR1-221ENST00000484370 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
FGFR1-221ENST00000484370 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
FGFR1-221ENST00000484370 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
FGFR1-221ENST00000484370 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
FGFR1-221ENST00000484370 NESP48681 1621 aa24.24■■□□□ 1.47
FGFR1-221ENST00000484370 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
FGFR1-221ENST00000484370 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
FGFR1-221ENST00000484370 CFTRP13569 1480 aa24.09■■□□□ 1.45
FGFR1-221ENST00000484370 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
FGFR1-221ENST00000484370 ERCC6Q03468 1493 aa24■■□□□ 1.43
FGFR1-221ENST00000484370 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
FGFR1-221ENST00000484370 PRDM2Q13029 1718 aa23.91■■□□□ 1.42
FGFR1-221ENST00000484370 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
FGFR1-221ENST00000484370 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
FGFR1-221ENST00000484370 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
FGFR1-221ENST00000484370 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
FGFR1-221ENST00000484370 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
FGFR1-221ENST00000484370 WDR62O43379 1518 aa23.64■■□□□ 1.38
FGFR1-221ENST00000484370 CUX2O14529 1486 aa23.6■■□□□ 1.37
FGFR1-221ENST00000484370 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
FGFR1-221ENST00000484370 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
FGFR1-221ENST00000484370 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
FGFR1-221ENST00000484370 CUX1P39880 1505 aa23.5■■□□□ 1.35
FGFR1-221ENST00000484370 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
FGFR1-221ENST00000484370 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
FGFR1-221ENST00000484370 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
FGFR1-221ENST00000484370 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
FGFR1-221ENST00000484370 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
FGFR1-221ENST00000484370 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
FGFR1-221ENST00000484370 SOGA1O94964 1423 aa23.33■■□□□ 1.32
FGFR1-221ENST00000484370 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
FGFR1-221ENST00000484370 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
FGFR1-221ENST00000484370 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
FGFR1-221ENST00000484370 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
FGFR1-221ENST00000484370 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
FGFR1-221ENST00000484370 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
FGFR1-221ENST00000484370 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
FGFR1-221ENST00000484370 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
FGFR1-221ENST00000484370 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
FGFR1-221ENST00000484370 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
FGFR1-221ENST00000484370 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
FGFR1-221ENST00000484370 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
FGFR1-221ENST00000484370 ABCA5Q8WWZ7 1642 aa23.01■■□□□ 1.27
FGFR1-221ENST00000484370 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
FGFR1-221ENST00000484370 KIF27Q86VH2 1401 aa22.96■■□□□ 1.27
FGFR1-221ENST00000484370 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
FGFR1-221ENST00000484370 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
FGFR1-221ENST00000484370 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.26
FGFR1-221ENST00000484370 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
FGFR1-221ENST00000484370 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
FGFR1-221ENST00000484370 FBLN2P98095 1184 aa22.85■■□□□ 1.25
FGFR1-221ENST00000484370 IGF1RP08069 1367 aa22.84■■□□□ 1.25
FGFR1-221ENST00000484370 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-221ENST00000484370 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
FGFR1-221ENST00000484370 CHD1O14646 1710 aa22.79■■□□□ 1.24
FGFR1-221ENST00000484370 ADAMTS12P58397 1594 aa22.78■■□□□ 1.24
FGFR1-221ENST00000484370 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
FGFR1-221ENST00000484370 FAM9AQ8IZU1 332 aaPredicted RBP22.75■■□□□ 1.23
FGFR1-221ENST00000484370 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
FGFR1-221ENST00000484370 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
FGFR1-221ENST00000484370 CUL7Q14999 1698 aa22.71■■□□□ 1.23
FGFR1-221ENST00000484370 EEA1Q15075 1411 aa22.7■■□□□ 1.22
FGFR1-221ENST00000484370 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
FGFR1-221ENST00000484370 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
FGFR1-221ENST00000484370 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
FGFR1-221ENST00000484370 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
FGFR1-221ENST00000484370 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
FGFR1-221ENST00000484370 NUP160Q12769 1436 aa22.57■■□□□ 1.2
FGFR1-221ENST00000484370 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
FGFR1-221ENST00000484370 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
FGFR1-221ENST00000484370 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
FGFR1-221ENST00000484370 KIF21BO75037 1637 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms