RNA–Protein interactions for RNA: ENST00000483797.1

PNKD-207, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-207ENST00000483797 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
PNKD-207ENST00000483797 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
PNKD-207ENST00000483797 ABCC9O60706 1549 aa30.1■■■□□ 2.41
PNKD-207ENST00000483797 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
PNKD-207ENST00000483797 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
PNKD-207ENST00000483797 NACADO15069 1562 aa29.02■■■□□ 2.24
PNKD-207ENST00000483797 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
PNKD-207ENST00000483797 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
PNKD-207ENST00000483797 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
PNKD-207ENST00000483797 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
PNKD-207ENST00000483797 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
PNKD-207ENST00000483797 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
PNKD-207ENST00000483797 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
PNKD-207ENST00000483797 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
PNKD-207ENST00000483797 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
PNKD-207ENST00000483797 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
PNKD-207ENST00000483797 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
PNKD-207ENST00000483797 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
PNKD-207ENST00000483797 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
PNKD-207ENST00000483797 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
PNKD-207ENST00000483797 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
PNKD-207ENST00000483797 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
PNKD-207ENST00000483797 RSF1Q96T23 1441 aaPredicted RBP26.89■■□□□ 1.89
PNKD-207ENST00000483797 WIZO95785 1651 aa26.89■■□□□ 1.89
PNKD-207ENST00000483797 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
PNKD-207ENST00000483797 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PNKD-207ENST00000483797 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
PNKD-207ENST00000483797 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
PNKD-207ENST00000483797 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
PNKD-207ENST00000483797 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
PNKD-207ENST00000483797 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
PNKD-207ENST00000483797 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
PNKD-207ENST00000483797 NESP48681 1621 aa26.21■■□□□ 1.79
PNKD-207ENST00000483797 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
PNKD-207ENST00000483797 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
PNKD-207ENST00000483797 CFTRP13569 1480 aa25.97■■□□□ 1.75
PNKD-207ENST00000483797 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
PNKD-207ENST00000483797 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
PNKD-207ENST00000483797 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
PNKD-207ENST00000483797 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
PNKD-207ENST00000483797 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
PNKD-207ENST00000483797 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
PNKD-207ENST00000483797 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PNKD-207ENST00000483797 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
PNKD-207ENST00000483797 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
PNKD-207ENST00000483797 WDR62O43379 1518 aa25.5■■□□□ 1.67
PNKD-207ENST00000483797 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
PNKD-207ENST00000483797 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
PNKD-207ENST00000483797 CUX1P39880 1505 aa25.42■■□□□ 1.66
PNKD-207ENST00000483797 DNMBPQ6XZF7 1577 aa25.41■■□□□ 1.66
PNKD-207ENST00000483797 CUX2O14529 1486 aa25.36■■□□□ 1.65
PNKD-207ENST00000483797 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
PNKD-207ENST00000483797 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
PNKD-207ENST00000483797 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
PNKD-207ENST00000483797 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
PNKD-207ENST00000483797 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
PNKD-207ENST00000483797 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
PNKD-207ENST00000483797 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
PNKD-207ENST00000483797 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
PNKD-207ENST00000483797 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
PNKD-207ENST00000483797 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
PNKD-207ENST00000483797 SOGA1O94964 1423 aa25.1■■□□□ 1.61
PNKD-207ENST00000483797 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
PNKD-207ENST00000483797 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
PNKD-207ENST00000483797 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
PNKD-207ENST00000483797 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.592e-6■■■■■ 35.3
PNKD-207ENST00000483797 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
PNKD-207ENST00000483797 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
PNKD-207ENST00000483797 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
PNKD-207ENST00000483797 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
PNKD-207ENST00000483797 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
PNKD-207ENST00000483797 GAPVD1Q14C86 1478 aa24.82■■□□□ 1.56
PNKD-207ENST00000483797 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
PNKD-207ENST00000483797 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
PNKD-207ENST00000483797 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
PNKD-207ENST00000483797 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
PNKD-207ENST00000483797 CHD1O14646 1710 aa24.66■■□□□ 1.54
PNKD-207ENST00000483797 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
PNKD-207ENST00000483797 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
PNKD-207ENST00000483797 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
PNKD-207ENST00000483797 IGF1RP08069 1367 aa24.61■■□□□ 1.53
PNKD-207ENST00000483797 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
PNKD-207ENST00000483797 SYNJ2O15056 1496 aa24.55■■□□□ 1.52
PNKD-207ENST00000483797 FBLN2P98095 1184 aa24.54■■□□□ 1.52
PNKD-207ENST00000483797 CUL7Q14999 1698 aa24.52■■□□□ 1.52
PNKD-207ENST00000483797 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
PNKD-207ENST00000483797 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
PNKD-207ENST00000483797 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
PNKD-207ENST00000483797 CARMIL1Q5VZK9 1371 aa24.45■■□□□ 1.5
PNKD-207ENST00000483797 EEA1Q15075 1411 aa24.41■■□□□ 1.5
PNKD-207ENST00000483797 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
PNKD-207ENST00000483797 CEP170Q5SW79 1584 aa24.4■■□□□ 1.5
PNKD-207ENST00000483797 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
PNKD-207ENST00000483797 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
PNKD-207ENST00000483797 RAPGEF2Q9Y4G8 1499 aa24.34■■□□□ 1.49
PNKD-207ENST00000483797 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
PNKD-207ENST00000483797 NUP160Q12769 1436 aa24.33■■□□□ 1.49
PNKD-207ENST00000483797 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
PNKD-207ENST00000483797 KIF21BO75037 1637 aa24.26■■□□□ 1.47
PNKD-207ENST00000483797 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms