RNA–Protein interactions for RNA: ENST00000483569.1

EEFSEC-203, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 5

Gene EEFSEC, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-203ENST00000483569 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
EEFSEC-203ENST00000483569 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
EEFSEC-203ENST00000483569 ABCC9O60706 1549 aa30.87■■■□□ 2.53
EEFSEC-203ENST00000483569 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
EEFSEC-203ENST00000483569 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
EEFSEC-203ENST00000483569 NACADO15069 1562 aa29.86■■■□□ 2.37
EEFSEC-203ENST00000483569 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
EEFSEC-203ENST00000483569 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
EEFSEC-203ENST00000483569 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
EEFSEC-203ENST00000483569 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
EEFSEC-203ENST00000483569 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
EEFSEC-203ENST00000483569 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
EEFSEC-203ENST00000483569 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
EEFSEC-203ENST00000483569 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
EEFSEC-203ENST00000483569 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
EEFSEC-203ENST00000483569 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
EEFSEC-203ENST00000483569 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
EEFSEC-203ENST00000483569 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
EEFSEC-203ENST00000483569 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
EEFSEC-203ENST00000483569 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
EEFSEC-203ENST00000483569 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
EEFSEC-203ENST00000483569 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
EEFSEC-203ENST00000483569 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
EEFSEC-203ENST00000483569 NCAPD3P42695 1498 aa27.54■■■□□ 2
EEFSEC-203ENST00000483569 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
EEFSEC-203ENST00000483569 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
EEFSEC-203ENST00000483569 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
EEFSEC-203ENST00000483569 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
EEFSEC-203ENST00000483569 WIZO95785 1651 aa27.29■■□□□ 1.96
EEFSEC-203ENST00000483569 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
EEFSEC-203ENST00000483569 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
EEFSEC-203ENST00000483569 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
EEFSEC-203ENST00000483569 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
EEFSEC-203ENST00000483569 NESP48681 1621 aa26.74■■□□□ 1.87
EEFSEC-203ENST00000483569 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
EEFSEC-203ENST00000483569 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
EEFSEC-203ENST00000483569 CFTRP13569 1480 aa26.63■■□□□ 1.85
EEFSEC-203ENST00000483569 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
EEFSEC-203ENST00000483569 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
EEFSEC-203ENST00000483569 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
EEFSEC-203ENST00000483569 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
EEFSEC-203ENST00000483569 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
EEFSEC-203ENST00000483569 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
EEFSEC-203ENST00000483569 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
EEFSEC-203ENST00000483569 CUX2O14529 1486 aa26.29■■□□□ 1.8
EEFSEC-203ENST00000483569 WDR62O43379 1518 aa26.19■■□□□ 1.78
EEFSEC-203ENST00000483569 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
EEFSEC-203ENST00000483569 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
EEFSEC-203ENST00000483569 TOPBP1Q92547 1522 aa26.03■■□□□ 1.76
EEFSEC-203ENST00000483569 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
EEFSEC-203ENST00000483569 CUX1P39880 1505 aa25.88■■□□□ 1.73
EEFSEC-203ENST00000483569 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
EEFSEC-203ENST00000483569 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
EEFSEC-203ENST00000483569 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
EEFSEC-203ENST00000483569 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
EEFSEC-203ENST00000483569 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
EEFSEC-203ENST00000483569 SOGA1O94964 1423 aa25.73■■□□□ 1.71
EEFSEC-203ENST00000483569 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
EEFSEC-203ENST00000483569 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
EEFSEC-203ENST00000483569 TARBP1Q13395 1621 aaKnown RBP25.69■■□□□ 1.7
EEFSEC-203ENST00000483569 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
EEFSEC-203ENST00000483569 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
EEFSEC-203ENST00000483569 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
EEFSEC-203ENST00000483569 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
EEFSEC-203ENST00000483569 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
EEFSEC-203ENST00000483569 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
EEFSEC-203ENST00000483569 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
EEFSEC-203ENST00000483569 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
EEFSEC-203ENST00000483569 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
EEFSEC-203ENST00000483569 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
EEFSEC-203ENST00000483569 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
EEFSEC-203ENST00000483569 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
EEFSEC-203ENST00000483569 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
EEFSEC-203ENST00000483569 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
EEFSEC-203ENST00000483569 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
EEFSEC-203ENST00000483569 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
EEFSEC-203ENST00000483569 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
EEFSEC-203ENST00000483569 FBLN2P98095 1184 aa25.22■■□□□ 1.63
EEFSEC-203ENST00000483569 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
EEFSEC-203ENST00000483569 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
EEFSEC-203ENST00000483569 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
EEFSEC-203ENST00000483569 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
EEFSEC-203ENST00000483569 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
EEFSEC-203ENST00000483569 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
EEFSEC-203ENST00000483569 CHD1O14646 1710 aa25.16■■□□□ 1.62
EEFSEC-203ENST00000483569 IGF1RP08069 1367 aa25.14■■□□□ 1.61
EEFSEC-203ENST00000483569 CUL7Q14999 1698 aa25.08■■□□□ 1.61
EEFSEC-203ENST00000483569 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
EEFSEC-203ENST00000483569 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
EEFSEC-203ENST00000483569 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
EEFSEC-203ENST00000483569 EEA1Q15075 1411 aa25.01■■□□□ 1.59
EEFSEC-203ENST00000483569 NUP160Q12769 1436 aa24.96■■□□□ 1.59
EEFSEC-203ENST00000483569 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
EEFSEC-203ENST00000483569 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
EEFSEC-203ENST00000483569 RAPGEF2Q9Y4G8 1499 aa24.9■■□□□ 1.58
EEFSEC-203ENST00000483569 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
EEFSEC-203ENST00000483569 PRXQ9BXM0 1461 aa24.85■■□□□ 1.57
EEFSEC-203ENST00000483569 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
EEFSEC-203ENST00000483569 ARHGEF11O15085 1522 aa24.79■■□□□ 1.56
EEFSEC-203ENST00000483569 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms