RNA–Protein interactions for RNA: ENST00000483033.1

TMED5-205, Transcript of transmembrane p24 trafficking protein 5, humanhuman

TSL 2

Gene TMED5, Length 3,959 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED5-205ENST00000483033 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
TMED5-205ENST00000483033 ABCC9O60706 1549 aa15.64■□□□□ 0.09
TMED5-205ENST00000483033 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
TMED5-205ENST00000483033 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
TMED5-205ENST00000483033 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
TMED5-205ENST00000483033 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMED5-205ENST00000483033 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
TMED5-205ENST00000483033 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
TMED5-205ENST00000483033 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
TMED5-205ENST00000483033 NACADO15069 1562 aa14.67□□□□□ -0.06
TMED5-205ENST00000483033 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
TMED5-205ENST00000483033 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
TMED5-205ENST00000483033 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
TMED5-205ENST00000483033 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
TMED5-205ENST00000483033 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
TMED5-205ENST00000483033 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
TMED5-205ENST00000483033 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
TMED5-205ENST00000483033 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
TMED5-205ENST00000483033 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
TMED5-205ENST00000483033 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
TMED5-205ENST00000483033 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
TMED5-205ENST00000483033 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
TMED5-205ENST00000483033 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
TMED5-205ENST00000483033 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
TMED5-205ENST00000483033 SMARCA4P51532 1647 aa13.77□□□□□ -0.21
TMED5-205ENST00000483033 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
TMED5-205ENST00000483033 ATAD2BQ9ULI0 1458 aa13.73□□□□□ -0.21
TMED5-205ENST00000483033 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
TMED5-205ENST00000483033 WIZO95785 1651 aa13.69□□□□□ -0.22
TMED5-205ENST00000483033 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
TMED5-205ENST00000483033 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
TMED5-205ENST00000483033 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
TMED5-205ENST00000483033 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
TMED5-205ENST00000483033 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
TMED5-205ENST00000483033 NESP48681 1621 aa13.55□□□□□ -0.24
TMED5-205ENST00000483033 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
TMED5-205ENST00000483033 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
TMED5-205ENST00000483033 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
TMED5-205ENST00000483033 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
TMED5-205ENST00000483033 CCDC88BA6NC98 1476 aa13.39□□□□□ -0.27
TMED5-205ENST00000483033 CADPSQ9ULU8 1353 aa13.34□□□□□ -0.27
TMED5-205ENST00000483033 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
TMED5-205ENST00000483033 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
TMED5-205ENST00000483033 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
TMED5-205ENST00000483033 CFTRP13569 1480 aa13.21□□□□□ -0.3
TMED5-205ENST00000483033 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
TMED5-205ENST00000483033 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
TMED5-205ENST00000483033 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
TMED5-205ENST00000483033 KCNA4P22459 653 aa13.15□□□□□ -0.3
TMED5-205ENST00000483033 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
TMED5-205ENST00000483033 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
TMED5-205ENST00000483033 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
TMED5-205ENST00000483033 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
TMED5-205ENST00000483033 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
TMED5-205ENST00000483033 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
TMED5-205ENST00000483033 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
TMED5-205ENST00000483033 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
TMED5-205ENST00000483033 FBLN2P98095 1184 aa12.99□□□□□ -0.33
TMED5-205ENST00000483033 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
TMED5-205ENST00000483033 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
TMED5-205ENST00000483033 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
TMED5-205ENST00000483033 CUX2O14529 1486 aa12.95□□□□□ -0.34
TMED5-205ENST00000483033 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
TMED5-205ENST00000483033 WDR62O43379 1518 aa12.95□□□□□ -0.34
TMED5-205ENST00000483033 CUX1P39880 1505 aa12.94□□□□□ -0.34
TMED5-205ENST00000483033 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
TMED5-205ENST00000483033 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■□□ 16.4
TMED5-205ENST00000483033 FGD5Q6ZNL6 1462 aa12.92□□□□□ -0.34
TMED5-205ENST00000483033 FAM9AQ8IZU1 332 aaPredicted RBP12.91□□□□□ -0.34
TMED5-205ENST00000483033 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
TMED5-205ENST00000483033 SOGA1O94964 1423 aa12.91□□□□□ -0.34
TMED5-205ENST00000483033 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
TMED5-205ENST00000483033 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
TMED5-205ENST00000483033 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
TMED5-205ENST00000483033 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
TMED5-205ENST00000483033 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
TMED5-205ENST00000483033 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
TMED5-205ENST00000483033 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
TMED5-205ENST00000483033 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
TMED5-205ENST00000483033 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
TMED5-205ENST00000483033 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
TMED5-205ENST00000483033 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
TMED5-205ENST00000483033 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
TMED5-205ENST00000483033 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
TMED5-205ENST00000483033 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
TMED5-205ENST00000483033 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
TMED5-205ENST00000483033 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.37
TMED5-205ENST00000483033 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
TMED5-205ENST00000483033 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
TMED5-205ENST00000483033 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
TMED5-205ENST00000483033 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
TMED5-205ENST00000483033 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
TMED5-205ENST00000483033 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
TMED5-205ENST00000483033 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
TMED5-205ENST00000483033 IGF1RP08069 1367 aa12.6□□□□□ -0.39
TMED5-205ENST00000483033 CYB5RLQ6IPT4 315 aa12.58□□□□□ -0.4
TMED5-205ENST00000483033 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
TMED5-205ENST00000483033 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
TMED5-205ENST00000483033 CHD1O14646 1710 aa12.57□□□□□ -0.4
TMED5-205ENST00000483033 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms