RNA–Protein interactions for RNA: ENST00000482662.1

GGCX-209, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 3

Gene GGCX, Length 720 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-209ENST00000482662 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
GGCX-209ENST00000482662 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
GGCX-209ENST00000482662 ABCC9O60706 1549 aa22.46■■□□□ 1.19
GGCX-209ENST00000482662 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
GGCX-209ENST00000482662 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
GGCX-209ENST00000482662 NACADO15069 1562 aa21.76■■□□□ 1.07
GGCX-209ENST00000482662 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
GGCX-209ENST00000482662 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
GGCX-209ENST00000482662 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
GGCX-209ENST00000482662 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
GGCX-209ENST00000482662 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
GGCX-209ENST00000482662 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
GGCX-209ENST00000482662 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
GGCX-209ENST00000482662 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
GGCX-209ENST00000482662 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
GGCX-209ENST00000482662 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
GGCX-209ENST00000482662 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
GGCX-209ENST00000482662 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
GGCX-209ENST00000482662 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
GGCX-209ENST00000482662 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
GGCX-209ENST00000482662 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
GGCX-209ENST00000482662 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
GGCX-209ENST00000482662 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
GGCX-209ENST00000482662 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
GGCX-209ENST00000482662 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
GGCX-209ENST00000482662 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
GGCX-209ENST00000482662 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
GGCX-209ENST00000482662 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
GGCX-209ENST00000482662 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
GGCX-209ENST00000482662 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
GGCX-209ENST00000482662 WIZO95785 1651 aa19.75■□□□□ 0.75
GGCX-209ENST00000482662 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
GGCX-209ENST00000482662 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
GGCX-209ENST00000482662 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
GGCX-209ENST00000482662 NESP48681 1621 aa19.47■□□□□ 0.71
GGCX-209ENST00000482662 CFTRP13569 1480 aa19.43■□□□□ 0.7
GGCX-209ENST00000482662 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
GGCX-209ENST00000482662 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
GGCX-209ENST00000482662 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
GGCX-209ENST00000482662 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
GGCX-209ENST00000482662 CUX2O14529 1486 aa19.23■□□□□ 0.67
GGCX-209ENST00000482662 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
GGCX-209ENST00000482662 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
GGCX-209ENST00000482662 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
GGCX-209ENST00000482662 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
GGCX-209ENST00000482662 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.66
GGCX-209ENST00000482662 WDR62O43379 1518 aa19.12■□□□□ 0.65
GGCX-209ENST00000482662 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
GGCX-209ENST00000482662 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
GGCX-209ENST00000482662 ABCC8Q09428 1581 aa19■□□□□ 0.63
GGCX-209ENST00000482662 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
GGCX-209ENST00000482662 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
GGCX-209ENST00000482662 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
GGCX-209ENST00000482662 CUX1P39880 1505 aa18.81■□□□□ 0.6
GGCX-209ENST00000482662 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
GGCX-209ENST00000482662 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
GGCX-209ENST00000482662 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
GGCX-209ENST00000482662 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
GGCX-209ENST00000482662 SOGA1O94964 1423 aa18.71■□□□□ 0.59
GGCX-209ENST00000482662 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
GGCX-209ENST00000482662 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
GGCX-209ENST00000482662 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
GGCX-209ENST00000482662 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
GGCX-209ENST00000482662 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
GGCX-209ENST00000482662 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
GGCX-209ENST00000482662 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
GGCX-209ENST00000482662 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.563e-9■■■■■ 30.5
GGCX-209ENST00000482662 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
GGCX-209ENST00000482662 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
GGCX-209ENST00000482662 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
GGCX-209ENST00000482662 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
GGCX-209ENST00000482662 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
GGCX-209ENST00000482662 ABCA5Q8WWZ7 1642 aa18.47■□□□□ 0.55
GGCX-209ENST00000482662 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.54
GGCX-209ENST00000482662 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
GGCX-209ENST00000482662 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
GGCX-209ENST00000482662 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
GGCX-209ENST00000482662 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
GGCX-209ENST00000482662 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
GGCX-209ENST00000482662 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
GGCX-209ENST00000482662 IGF1RP08069 1367 aa18.31■□□□□ 0.52
GGCX-209ENST00000482662 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
GGCX-209ENST00000482662 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
GGCX-209ENST00000482662 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
GGCX-209ENST00000482662 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
GGCX-209ENST00000482662 GRIN2AQ12879 1464 aa18.25■□□□□ 0.51
GGCX-209ENST00000482662 FBLN2P98095 1184 aa18.24■□□□□ 0.51
GGCX-209ENST00000482662 NUP160Q12769 1436 aa18.23■□□□□ 0.51
GGCX-209ENST00000482662 CHD1O14646 1710 aa18.21■□□□□ 0.51
GGCX-209ENST00000482662 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
GGCX-209ENST00000482662 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
GGCX-209ENST00000482662 CUL7Q14999 1698 aa18.15■□□□□ 0.5
GGCX-209ENST00000482662 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
GGCX-209ENST00000482662 EEA1Q15075 1411 aa18.12■□□□□ 0.49
GGCX-209ENST00000482662 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
GGCX-209ENST00000482662 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
GGCX-209ENST00000482662 PRXQ9BXM0 1461 aa18.08■□□□□ 0.49
GGCX-209ENST00000482662 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
GGCX-209ENST00000482662 KIAA0586Q9BVV6 1533 aa18.05■□□□□ 0.48
GGCX-209ENST00000482662 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms