RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 AEBP2Q6ZN18 517 aaPredicted RBP10.82□□□□□ -0.68
SHANK2-216ENST00000482659 NISCHQ9Y2I1 1504 aa10.7□□□□□ -0.7
SHANK2-216ENST00000482659 CHIC1Q5VXU3 224 aa10.6□□□□□ -0.71
SHANK2-216ENST00000482659 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
SHANK2-216ENST00000482659 PHF23Q9BUL5 403 aaPredicted RBP9.32□□□□□ -0.92
SHANK2-216ENST00000482659 ABCC9O60706 1549 aa9.22□□□□□ -0.93
SHANK2-216ENST00000482659 SENP3Q9H4L4 574 aaPredicted RBP9.16□□□□□ -0.94
SHANK2-216ENST00000482659 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
SHANK2-216ENST00000482659 MYO15BQ96JP2 1530 aa8.92□□□□□ -0.98
SHANK2-216ENST00000482659 NACADO15069 1562 aa8.91□□□□□ -0.98
SHANK2-216ENST00000482659 ZCCHC6Q5VYS8 1495 aaKnown RBP8.9□□□□□ -0.98
SHANK2-216ENST00000482659 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
SHANK2-216ENST00000482659 DCAF1Q9Y4B6 1507 aa8.88□□□□□ -0.99
SHANK2-216ENST00000482659 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
SHANK2-216ENST00000482659 PLPPR3Q6T4P5 718 aa8.63□□□□□ -1.03
SHANK2-216ENST00000482659 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
SHANK2-216ENST00000482659 SCRIBQ14160 1630 aa8.58□□□□□ -1.04
SHANK2-216ENST00000482659 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
SHANK2-216ENST00000482659 FOXD1Q16676 465 aa8.5□□□□□ -1.05
SHANK2-216ENST00000482659 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
SHANK2-216ENST00000482659 UNC13AQ9UPW8 1703 aa8.42□□□□□ -1.06
SHANK2-216ENST00000482659 EIF4G1Q04637 1599 aaKnown RBP8.36□□□□□ -1.07
SHANK2-216ENST00000482659 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
SHANK2-216ENST00000482659 BAZ1AQ9NRL2 1556 aaPredicted RBP8.3□□□□□ -1.08
SHANK2-216ENST00000482659 NCAPD3P42695 1498 aa8.28□□□□□ -1.08
SHANK2-216ENST00000482659 CC2D2AQ9P2K1 1620 aa8.28□□□□□ -1.08
SHANK2-216ENST00000482659 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
SHANK2-216ENST00000482659 SMARCA2P51531 1590 aa8.23□□□□□ -1.09
SHANK2-216ENST00000482659 PPP6R1Q9UPN7 881 aa8.22□□□□□ -1.09
SHANK2-216ENST00000482659 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
SHANK2-216ENST00000482659 SMARCA4P51532 1647 aa8.21□□□□□ -1.09
SHANK2-216ENST00000482659 RSF1Q96T23 1441 aaPredicted RBP8.21□□□□□ -1.09
SHANK2-216ENST00000482659 ADRA2BP18089 450 aa8.2□□□□□ -1.1
SHANK2-216ENST00000482659 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
SHANK2-216ENST00000482659 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
SHANK2-216ENST00000482659 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
SHANK2-216ENST00000482659 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
SHANK2-216ENST00000482659 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
SHANK2-216ENST00000482659 TOP2AP11388 1531 aaKnown RBP8.05□□□□□ -1.12
SHANK2-216ENST00000482659 WIZO95785 1651 aa8.05□□□□□ -1.12
SHANK2-216ENST00000482659 PIAS4Q8N2W9 510 aaPredicted RBP8.03□□□□□ -1.12
SHANK2-216ENST00000482659 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
SHANK2-216ENST00000482659 CCDC88BA6NC98 1476 aa8□□□□□ -1.13
SHANK2-216ENST00000482659 ERCC6Q03468 1493 aa8□□□□□ -1.13
SHANK2-216ENST00000482659 CFTRP13569 1480 aa7.99□□□□□ -1.13
SHANK2-216ENST00000482659 LAMC3Q9Y6N6 1575 aa7.97□□□□□ -1.13
SHANK2-216ENST00000482659 NESP48681 1621 aa7.96□□□□□ -1.14
SHANK2-216ENST00000482659 FANCD2Q9BXW9 1451 aa7.92□□□□□ -1.14
SHANK2-216ENST00000482659 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
SHANK2-216ENST00000482659 CUX2O14529 1486 aa7.88□□□□□ -1.15
SHANK2-216ENST00000482659 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
SHANK2-216ENST00000482659 ABCC8Q09428 1581 aa7.85□□□□□ -1.15
SHANK2-216ENST00000482659 MSH5O43196 834 aa7.83□□□□□ -1.16
SHANK2-216ENST00000482659 WDR62O43379 1518 aa7.8□□□□□ -1.16
SHANK2-216ENST00000482659 URB2Q14146 1524 aaKnown RBP7.78□□□□□ -1.16
SHANK2-216ENST00000482659 THOC2Q8NI27 1593 aaKnown RBP7.76□□□□□ -1.17
SHANK2-216ENST00000482659 TOPBP1Q92547 1522 aa7.76□□□□□ -1.17
SHANK2-216ENST00000482659 WRNQ14191 1432 aaPredicted RBP eCLIP7.76□□□□□ -1.17
SHANK2-216ENST00000482659 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
SHANK2-216ENST00000482659 SOGA1O94964 1423 aa7.75□□□□□ -1.17
SHANK2-216ENST00000482659 DNMBPQ6XZF7 1577 aa7.74□□□□□ -1.17
SHANK2-216ENST00000482659 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
SHANK2-216ENST00000482659 POLA1P09884 1462 aaPredicted RBP7.7□□□□□ -1.18
SHANK2-216ENST00000482659 CUX1P39880 1505 aa7.7□□□□□ -1.18
SHANK2-216ENST00000482659 FGD5Q6ZNL6 1462 aa7.69□□□□□ -1.18
SHANK2-216ENST00000482659 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
SHANK2-216ENST00000482659 TDRD9Q8NDG6 1382 aaKnown RBP7.69□□□□□ -1.18
SHANK2-216ENST00000482659 RAD54L2Q9Y4B4 1467 aa7.67□□□□□ -1.18
SHANK2-216ENST00000482659 OSCARQ8IYS5 282 aa7.66□□□□□ -1.18
SHANK2-216ENST00000482659 AQRO60306 1485 aaKnown RBP eCLIP7.65□□□□□ -1.18
SHANK2-216ENST00000482659 PRDM2Q13029 1718 aa7.65□□□□□ -1.18
SHANK2-216ENST00000482659 ZNF608Q9ULD9 1512 aaPredicted RBP7.65□□□□□ -1.18
SHANK2-216ENST00000482659 ABCA10Q8WWZ4 1543 aa7.64□□□□□ -1.19
SHANK2-216ENST00000482659 CHMP7Q8WUX9 453 aaPredicted RBP7.64□□□□□ -1.19
SHANK2-216ENST00000482659 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
SHANK2-216ENST00000482659 TOP2BQ02880 1626 aa7.63□□□□□ -1.19
SHANK2-216ENST00000482659 FBLN2P98095 1184 aa7.63□□□□□ -1.19
SHANK2-216ENST00000482659 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 KIF27Q86VH2 1401 aa7.62□□□□□ -1.19
SHANK2-216ENST00000482659 WDR97A6NE52 1622 aa7.61□□□□□ -1.19
SHANK2-216ENST00000482659 TARBP1Q13395 1621 aaKnown RBP7.6□□□□□ -1.19
SHANK2-216ENST00000482659 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
SHANK2-216ENST00000482659 PPP4R3CPQ6ZMV5 832 aa7.6□□□□□ -1.19
SHANK2-216ENST00000482659 MAGI1Q96QZ7 1491 aaPredicted RBP7.59□□□□□ -1.19
SHANK2-216ENST00000482659 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
SHANK2-216ENST00000482659 IGF1RP08069 1367 aa7.58□□□□□ -1.2
SHANK2-216ENST00000482659 FHAD1B1AJZ9 1412 aa7.57□□□□□ -1.2
SHANK2-216ENST00000482659 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
SHANK2-216ENST00000482659 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
SHANK2-216ENST00000482659 EIF4G3O43432 1585 aaKnown RBP7.55□□□□□ -1.2
SHANK2-216ENST00000482659 ERICH3Q5RHP9 1530 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 CSRNP3Q8WYN3 585 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
SHANK2-216ENST00000482659 EEA1Q15075 1411 aa7.53□□□□□ -1.2
SHANK2-216ENST00000482659 SCAF1Q9H7N4 1312 aaKnown RBP7.52□□□□□ -1.21
SHANK2-216ENST00000482659 ABCA5Q8WWZ7 1642 aa7.51□□□□□ -1.21
SHANK2-216ENST00000482659 GRIN2AQ12879 1464 aa7.49□□□□□ -1.21
SHANK2-216ENST00000482659 JPH4Q96JJ6 628 aa7.49□□□□□ -1.21
SHANK2-216ENST00000482659 NUP160Q12769 1436 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms