RNA–Protein interactions for RNA: ENST00000481754.1

GPN1-208, Transcript of GPN-loop GTPase 1, humanhuman

TSL 4

Gene GPN1, Length 537 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-208ENST00000481754 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
GPN1-208ENST00000481754 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
GPN1-208ENST00000481754 ABCC9O60706 1549 aa20.83■□□□□ 0.93
GPN1-208ENST00000481754 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
GPN1-208ENST00000481754 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
GPN1-208ENST00000481754 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
GPN1-208ENST00000481754 NACADO15069 1562 aa20.25■□□□□ 0.83
GPN1-208ENST00000481754 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
GPN1-208ENST00000481754 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
GPN1-208ENST00000481754 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
GPN1-208ENST00000481754 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
GPN1-208ENST00000481754 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
GPN1-208ENST00000481754 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
GPN1-208ENST00000481754 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
GPN1-208ENST00000481754 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
GPN1-208ENST00000481754 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
GPN1-208ENST00000481754 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
GPN1-208ENST00000481754 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
GPN1-208ENST00000481754 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
GPN1-208ENST00000481754 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
GPN1-208ENST00000481754 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
GPN1-208ENST00000481754 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
GPN1-208ENST00000481754 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
GPN1-208ENST00000481754 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
GPN1-208ENST00000481754 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
GPN1-208ENST00000481754 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
GPN1-208ENST00000481754 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
GPN1-208ENST00000481754 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
GPN1-208ENST00000481754 WIZO95785 1651 aa18.63■□□□□ 0.57
GPN1-208ENST00000481754 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
GPN1-208ENST00000481754 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
GPN1-208ENST00000481754 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
GPN1-208ENST00000481754 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
GPN1-208ENST00000481754 CFTRP13569 1480 aa18.14■□□□□ 0.5
GPN1-208ENST00000481754 LAMC3Q9Y6N6 1575 aa18.11■□□□□ 0.49
GPN1-208ENST00000481754 NESP48681 1621 aa18.09■□□□□ 0.49
GPN1-208ENST00000481754 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
GPN1-208ENST00000481754 ERCC6Q03468 1493 aa18■□□□□ 0.47
GPN1-208ENST00000481754 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
GPN1-208ENST00000481754 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
GPN1-208ENST00000481754 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
GPN1-208ENST00000481754 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
GPN1-208ENST00000481754 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
GPN1-208ENST00000481754 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
GPN1-208ENST00000481754 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
GPN1-208ENST00000481754 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
GPN1-208ENST00000481754 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
GPN1-208ENST00000481754 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
GPN1-208ENST00000481754 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
GPN1-208ENST00000481754 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
GPN1-208ENST00000481754 WDR62O43379 1518 aa17.68■□□□□ 0.42
GPN1-208ENST00000481754 CUX1P39880 1505 aa17.67■□□□□ 0.42
GPN1-208ENST00000481754 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
GPN1-208ENST00000481754 CUX2O14529 1486 aa17.62■□□□□ 0.41
GPN1-208ENST00000481754 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
GPN1-208ENST00000481754 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
GPN1-208ENST00000481754 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
GPN1-208ENST00000481754 SOGA1O94964 1423 aa17.59■□□□□ 0.41
GPN1-208ENST00000481754 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
GPN1-208ENST00000481754 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
GPN1-208ENST00000481754 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
GPN1-208ENST00000481754 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
GPN1-208ENST00000481754 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
GPN1-208ENST00000481754 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
GPN1-208ENST00000481754 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
GPN1-208ENST00000481754 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
GPN1-208ENST00000481754 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
GPN1-208ENST00000481754 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.37
GPN1-208ENST00000481754 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
GPN1-208ENST00000481754 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
GPN1-208ENST00000481754 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
GPN1-208ENST00000481754 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
GPN1-208ENST00000481754 EEA1Q15075 1411 aa17.33■□□□□ 0.36
GPN1-208ENST00000481754 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
GPN1-208ENST00000481754 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
GPN1-208ENST00000481754 IGF1RP08069 1367 aa17.29■□□□□ 0.36
GPN1-208ENST00000481754 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
GPN1-208ENST00000481754 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
GPN1-208ENST00000481754 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
GPN1-208ENST00000481754 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
GPN1-208ENST00000481754 ERICH3Q5RHP9 1530 aa17.24■□□□□ 0.35
GPN1-208ENST00000481754 FBLN2P98095 1184 aa17.23■□□□□ 0.35
GPN1-208ENST00000481754 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
GPN1-208ENST00000481754 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
GPN1-208ENST00000481754 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
GPN1-208ENST00000481754 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
GPN1-208ENST00000481754 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
GPN1-208ENST00000481754 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
GPN1-208ENST00000481754 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
GPN1-208ENST00000481754 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
GPN1-208ENST00000481754 CUL7Q14999 1698 aa17.1■□□□□ 0.33
GPN1-208ENST00000481754 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
GPN1-208ENST00000481754 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
GPN1-208ENST00000481754 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
GPN1-208ENST00000481754 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
GPN1-208ENST00000481754 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
GPN1-208ENST00000481754 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
GPN1-208ENST00000481754 KIF21BO75037 1637 aa16.99■□□□□ 0.31
GPN1-208ENST00000481754 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
GPN1-208ENST00000481754 NUP160Q12769 1436 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms