RNA–Protein interactions for RNA: ENST00000481735.1

GINS1-203, Transcript of GINS complex subunit 1, humanhuman

TSL 3

Gene GINS1, Length 396 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-203ENST00000481735 NISCHQ9Y2I1 1504 aa14.28□□□□□ -0.12
GINS1-203ENST00000481735 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
GINS1-203ENST00000481735 ABCC9O60706 1549 aa12.42□□□□□ -0.42
GINS1-203ENST00000481735 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
GINS1-203ENST00000481735 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
GINS1-203ENST00000481735 NACADO15069 1562 aa11.84□□□□□ -0.51
GINS1-203ENST00000481735 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
GINS1-203ENST00000481735 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
GINS1-203ENST00000481735 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
GINS1-203ENST00000481735 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
GINS1-203ENST00000481735 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
GINS1-203ENST00000481735 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.56
GINS1-203ENST00000481735 BICRAQ9NZM4 1560 aa11.47□□□□□ -0.57
GINS1-203ENST00000481735 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
GINS1-203ENST00000481735 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
GINS1-203ENST00000481735 EIF4G1Q04637 1599 aaKnown RBP11.19□□□□□ -0.62
GINS1-203ENST00000481735 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
GINS1-203ENST00000481735 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
GINS1-203ENST00000481735 AEBP2Q6ZN18 517 aaPredicted RBP11.09□□□□□ -0.63
GINS1-203ENST00000481735 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
GINS1-203ENST00000481735 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
GINS1-203ENST00000481735 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
GINS1-203ENST00000481735 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
GINS1-203ENST00000481735 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
GINS1-203ENST00000481735 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
GINS1-203ENST00000481735 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
GINS1-203ENST00000481735 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
GINS1-203ENST00000481735 SUPT5HO00267 1087 aaKnown RBP10.91□□□□□ -0.66
GINS1-203ENST00000481735 WIZO95785 1651 aa10.87□□□□□ -0.67
GINS1-203ENST00000481735 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
GINS1-203ENST00000481735 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
GINS1-203ENST00000481735 TOP2AP11388 1531 aaKnown RBP10.75□□□□□ -0.69
GINS1-203ENST00000481735 NESP48681 1621 aa10.75□□□□□ -0.69
GINS1-203ENST00000481735 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
GINS1-203ENST00000481735 CCDC88BA6NC98 1476 aa10.71□□□□□ -0.69
GINS1-203ENST00000481735 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
GINS1-203ENST00000481735 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
GINS1-203ENST00000481735 CFTRP13569 1480 aa10.62□□□□□ -0.71
GINS1-203ENST00000481735 LAMC3Q9Y6N6 1575 aa10.61□□□□□ -0.71
GINS1-203ENST00000481735 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
GINS1-203ENST00000481735 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
GINS1-203ENST00000481735 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
GINS1-203ENST00000481735 CUX2O14529 1486 aa10.47□□□□□ -0.73
GINS1-203ENST00000481735 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
GINS1-203ENST00000481735 URB2Q14146 1524 aaKnown RBP10.44□□□□□ -0.74
GINS1-203ENST00000481735 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
GINS1-203ENST00000481735 WDR62O43379 1518 aa10.41□□□□□ -0.74
GINS1-203ENST00000481735 TOPBP1Q92547 1522 aa10.38□□□□□ -0.75
GINS1-203ENST00000481735 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
GINS1-203ENST00000481735 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
GINS1-203ENST00000481735 CHIC1Q5VXU3 224 aa10.34□□□□□ -0.75
GINS1-203ENST00000481735 DNMBPQ6XZF7 1577 aa10.34□□□□□ -0.75
GINS1-203ENST00000481735 SOGA1O94964 1423 aa10.33□□□□□ -0.76
GINS1-203ENST00000481735 CUX1P39880 1505 aa10.33□□□□□ -0.76
GINS1-203ENST00000481735 RAD54L2Q9Y4B4 1467 aa10.32□□□□□ -0.76
GINS1-203ENST00000481735 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
GINS1-203ENST00000481735 IFT140Q96RY7 1462 aa10.31□□□□□ -0.76
GINS1-203ENST00000481735 TDRD9Q8NDG6 1382 aaKnown RBP10.31□□□□□ -0.76
GINS1-203ENST00000481735 FGD5Q6ZNL6 1462 aa10.3□□□□□ -0.76
GINS1-203ENST00000481735 PRDM2Q13029 1718 aa10.3□□□□□ -0.76
GINS1-203ENST00000481735 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
GINS1-203ENST00000481735 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.76
GINS1-203ENST00000481735 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
GINS1-203ENST00000481735 FBLN2P98095 1184 aa10.26□□□□□ -0.77
GINS1-203ENST00000481735 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
GINS1-203ENST00000481735 TOP2BQ02880 1626 aa10.21□□□□□ -0.78
GINS1-203ENST00000481735 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
GINS1-203ENST00000481735 OSCARQ8IYS5 282 aa10.2□□□□□ -0.78
GINS1-203ENST00000481735 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
GINS1-203ENST00000481735 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
GINS1-203ENST00000481735 GAPVD1Q14C86 1478 aa10.18□□□□□ -0.78
GINS1-203ENST00000481735 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
GINS1-203ENST00000481735 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
GINS1-203ENST00000481735 BIVM-ERCC5R4GMW8 1640 aa10.15□□□□□ -0.78
GINS1-203ENST00000481735 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
GINS1-203ENST00000481735 SNAPC4Q5SXM2 1469 aa10.14□□□□□ -0.79
GINS1-203ENST00000481735 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
GINS1-203ENST00000481735 FAM9AQ8IZU1 332 aaPredicted RBP10.12□□□□□ -0.79
GINS1-203ENST00000481735 IGF1RP08069 1367 aa10.11□□□□□ -0.79
GINS1-203ENST00000481735 MAGI1Q96QZ7 1491 aaPredicted RBP10.08□□□□□ -0.8
GINS1-203ENST00000481735 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
GINS1-203ENST00000481735 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
GINS1-203ENST00000481735 SYNJ2O15056 1496 aa10.06□□□□□ -0.8
GINS1-203ENST00000481735 CARMIL1Q5VZK9 1371 aa10.06□□□□□ -0.8
GINS1-203ENST00000481735 WDR97A6NE52 1622 aa10.06□□□□□ -0.8
GINS1-203ENST00000481735 ABCA5Q8WWZ7 1642 aa10.06□□□□□ -0.8
GINS1-203ENST00000481735 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
GINS1-203ENST00000481735 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
GINS1-203ENST00000481735 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
GINS1-203ENST00000481735 GRIN2AQ12879 1464 aa10.01□□□□□ -0.81
GINS1-203ENST00000481735 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
GINS1-203ENST00000481735 ADAMTS12P58397 1594 aa9.98□□□□□ -0.81
GINS1-203ENST00000481735 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
GINS1-203ENST00000481735 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
GINS1-203ENST00000481735 NUP160Q12769 1436 aa9.96□□□□□ -0.82
GINS1-203ENST00000481735 CHD1O14646 1710 aa9.96□□□□□ -0.82
GINS1-203ENST00000481735 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
GINS1-203ENST00000481735 TTBK1Q5TCY1 1321 aaPredicted RBP9.95□□□□□ -0.82
GINS1-203ENST00000481735 RAPGEF2Q9Y4G8 1499 aa9.95□□□□□ -0.82
GINS1-203ENST00000481735 EEA1Q15075 1411 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms