RNA–Protein interactions for RNA: ENST00000481648.5

SRSF11-213, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 3

Gene SRSF11, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-213ENST00000481648 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
SRSF11-213ENST00000481648 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
SRSF11-213ENST00000481648 ABCC9O60706 1549 aa21.5■■□□□ 1.03
SRSF11-213ENST00000481648 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
SRSF11-213ENST00000481648 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
SRSF11-213ENST00000481648 NACADO15069 1562 aa20.8■□□□□ 0.92
SRSF11-213ENST00000481648 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
SRSF11-213ENST00000481648 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
SRSF11-213ENST00000481648 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
SRSF11-213ENST00000481648 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
SRSF11-213ENST00000481648 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
SRSF11-213ENST00000481648 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■■■□ 19.7
SRSF11-213ENST00000481648 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
SRSF11-213ENST00000481648 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
SRSF11-213ENST00000481648 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
SRSF11-213ENST00000481648 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
SRSF11-213ENST00000481648 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
SRSF11-213ENST00000481648 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
SRSF11-213ENST00000481648 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
SRSF11-213ENST00000481648 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
SRSF11-213ENST00000481648 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
SRSF11-213ENST00000481648 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
SRSF11-213ENST00000481648 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
SRSF11-213ENST00000481648 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
SRSF11-213ENST00000481648 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
SRSF11-213ENST00000481648 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
SRSF11-213ENST00000481648 WIZO95785 1651 aa19.12■□□□□ 0.65
SRSF11-213ENST00000481648 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
SRSF11-213ENST00000481648 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
SRSF11-213ENST00000481648 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
SRSF11-213ENST00000481648 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
SRSF11-213ENST00000481648 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
SRSF11-213ENST00000481648 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
SRSF11-213ENST00000481648 NESP48681 1621 aa18.64■□□□□ 0.57
SRSF11-213ENST00000481648 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
SRSF11-213ENST00000481648 CFTRP13569 1480 aa18.56■□□□□ 0.56
SRSF11-213ENST00000481648 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
SRSF11-213ENST00000481648 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
SRSF11-213ENST00000481648 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
SRSF11-213ENST00000481648 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
SRSF11-213ENST00000481648 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
SRSF11-213ENST00000481648 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
SRSF11-213ENST00000481648 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
SRSF11-213ENST00000481648 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
SRSF11-213ENST00000481648 WDR62O43379 1518 aa18.23■□□□□ 0.51
SRSF11-213ENST00000481648 CUX2O14529 1486 aa18.22■□□□□ 0.51
SRSF11-213ENST00000481648 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
SRSF11-213ENST00000481648 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
SRSF11-213ENST00000481648 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
SRSF11-213ENST00000481648 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
SRSF11-213ENST00000481648 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
SRSF11-213ENST00000481648 CUX1P39880 1505 aa18.1■□□□□ 0.49
SRSF11-213ENST00000481648 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
SRSF11-213ENST00000481648 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
SRSF11-213ENST00000481648 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
SRSF11-213ENST00000481648 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
SRSF11-213ENST00000481648 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
SRSF11-213ENST00000481648 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
SRSF11-213ENST00000481648 SOGA1O94964 1423 aa17.98■□□□□ 0.47
SRSF11-213ENST00000481648 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
SRSF11-213ENST00000481648 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
SRSF11-213ENST00000481648 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
SRSF11-213ENST00000481648 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
SRSF11-213ENST00000481648 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
SRSF11-213ENST00000481648 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
SRSF11-213ENST00000481648 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
SRSF11-213ENST00000481648 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
SRSF11-213ENST00000481648 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.443e-16■□□□□ 8.9
SRSF11-213ENST00000481648 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
SRSF11-213ENST00000481648 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
SRSF11-213ENST00000481648 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
SRSF11-213ENST00000481648 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
SRSF11-213ENST00000481648 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
SRSF11-213ENST00000481648 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
SRSF11-213ENST00000481648 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
SRSF11-213ENST00000481648 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
SRSF11-213ENST00000481648 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
SRSF11-213ENST00000481648 FBLN2P98095 1184 aa17.63■□□□□ 0.41
SRSF11-213ENST00000481648 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
SRSF11-213ENST00000481648 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
SRSF11-213ENST00000481648 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
SRSF11-213ENST00000481648 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
SRSF11-213ENST00000481648 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
SRSF11-213ENST00000481648 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
SRSF11-213ENST00000481648 IGF1RP08069 1367 aa17.57■□□□□ 0.4
SRSF11-213ENST00000481648 CHD1O14646 1710 aa17.57■□□□□ 0.4
SRSF11-213ENST00000481648 CUL7Q14999 1698 aa17.55■□□□□ 0.4
SRSF11-213ENST00000481648 EEA1Q15075 1411 aa17.55■□□□□ 0.4
SRSF11-213ENST00000481648 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
SRSF11-213ENST00000481648 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
SRSF11-213ENST00000481648 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
SRSF11-213ENST00000481648 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
SRSF11-213ENST00000481648 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
SRSF11-213ENST00000481648 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
SRSF11-213ENST00000481648 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
SRSF11-213ENST00000481648 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
SRSF11-213ENST00000481648 NUP160Q12769 1436 aa17.38■□□□□ 0.37
SRSF11-213ENST00000481648 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
SRSF11-213ENST00000481648 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
SRSF11-213ENST00000481648 KIF21BO75037 1637 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms