RNA–Protein interactions for RNA: ENST00000481603.1

TRIM6-207, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-207ENST00000481603 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
TRIM6-207ENST00000481603 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
TRIM6-207ENST00000481603 CCDC180Q9P1Z9 1646 aa12.65□□□□□ -0.38
TRIM6-207ENST00000481603 ABCC9O60706 1549 aa12.62□□□□□ -0.39
TRIM6-207ENST00000481603 AEBP2Q6ZN18 517 aaPredicted RBP12.25□□□□□ -0.45
TRIM6-207ENST00000481603 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
TRIM6-207ENST00000481603 NACADO15069 1562 aa11.96□□□□□ -0.49
TRIM6-207ENST00000481603 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
TRIM6-207ENST00000481603 CHIC1Q5VXU3 224 aa11.88□□□□□ -0.51
TRIM6-207ENST00000481603 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
TRIM6-207ENST00000481603 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.53
TRIM6-207ENST00000481603 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
TRIM6-207ENST00000481603 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
TRIM6-207ENST00000481603 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
TRIM6-207ENST00000481603 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRIM6-207ENST00000481603 DCAF1Q9Y4B6 1507 aa11.58□□□□□ -0.56
TRIM6-207ENST00000481603 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
TRIM6-207ENST00000481603 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
TRIM6-207ENST00000481603 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
TRIM6-207ENST00000481603 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
TRIM6-207ENST00000481603 SCRIBQ14160 1630 aa11.36□□□□□ -0.59
TRIM6-207ENST00000481603 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
TRIM6-207ENST00000481603 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
TRIM6-207ENST00000481603 CUX2O14529 1486 aa11.09□□□□□ -0.63
TRIM6-207ENST00000481603 SENP3Q9H4L4 574 aaPredicted RBP11.09□□□□□ -0.63
TRIM6-207ENST00000481603 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
TRIM6-207ENST00000481603 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
TRIM6-207ENST00000481603 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
TRIM6-207ENST00000481603 HMGXB3Q12766 1538 aa10.96□□□□□ -0.66
TRIM6-207ENST00000481603 ERCC6Q03468 1493 aa10.94□□□□□ -0.66
TRIM6-207ENST00000481603 SMARCA2P51531 1590 aa10.93□□□□□ -0.66
TRIM6-207ENST00000481603 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
TRIM6-207ENST00000481603 SMARCA4P51532 1647 aa10.89□□□□□ -0.67
TRIM6-207ENST00000481603 MYT1Q01538 1121 aa10.85□□□□□ -0.67
TRIM6-207ENST00000481603 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
TRIM6-207ENST00000481603 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
TRIM6-207ENST00000481603 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
TRIM6-207ENST00000481603 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
TRIM6-207ENST00000481603 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
TRIM6-207ENST00000481603 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
TRIM6-207ENST00000481603 NESP48681 1621 aa10.79□□□□□ -0.68
TRIM6-207ENST00000481603 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
TRIM6-207ENST00000481603 KIF21AQ7Z4S6 1674 aa10.71□□□□□ -0.7
TRIM6-207ENST00000481603 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.7
TRIM6-207ENST00000481603 WIZO95785 1651 aa10.68□□□□□ -0.7
TRIM6-207ENST00000481603 WDR62O43379 1518 aa10.66□□□□□ -0.7
TRIM6-207ENST00000481603 MRC2Q9UBG0 1479 aa10.65□□□□□ -0.71
TRIM6-207ENST00000481603 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
TRIM6-207ENST00000481603 MSH5O43196 834 aa10.61□□□□□ -0.71
TRIM6-207ENST00000481603 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
TRIM6-207ENST00000481603 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
TRIM6-207ENST00000481603 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
TRIM6-207ENST00000481603 TOP2AP11388 1531 aaKnown RBP10.53□□□□□ -0.72
TRIM6-207ENST00000481603 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
TRIM6-207ENST00000481603 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
TRIM6-207ENST00000481603 PCGF6Q9BYE7 350 aa10.5□□□□□ -0.73
TRIM6-207ENST00000481603 CFTRP13569 1480 aa10.5□□□□□ -0.73
TRIM6-207ENST00000481603 HRCP23327 699 aa10.49□□□□□ -0.73
TRIM6-207ENST00000481603 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
TRIM6-207ENST00000481603 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
TRIM6-207ENST00000481603 OSCARQ8IYS5 282 aa10.44□□□□□ -0.74
TRIM6-207ENST00000481603 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
TRIM6-207ENST00000481603 CCDC88BA6NC98 1476 aa10.41□□□□□ -0.74
TRIM6-207ENST00000481603 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
TRIM6-207ENST00000481603 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
TRIM6-207ENST00000481603 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
TRIM6-207ENST00000481603 RIMBP3CA6NJZ7 1639 aa10.37□□□□□ -0.75
TRIM6-207ENST00000481603 RIMBP3BA6NNM3 1639 aa10.37□□□□□ -0.75
TRIM6-207ENST00000481603 RIMBP3Q9UFD9 1639 aa10.37□□□□□ -0.75
TRIM6-207ENST00000481603 TRIM26Q12899 539 aaPredicted RBP10.37□□□□□ -0.75
TRIM6-207ENST00000481603 ARHGEF11O15085 1522 aa10.31□□□□□ -0.76
TRIM6-207ENST00000481603 TOPBP1Q92547 1522 aa10.3□□□□□ -0.76
TRIM6-207ENST00000481603 FOXD1Q16676 465 aa10.29□□□□□ -0.76
TRIM6-207ENST00000481603 ZNF608Q9ULD9 1512 aaPredicted RBP10.29□□□□□ -0.76
TRIM6-207ENST00000481603 EIF4G3O43432 1585 aaKnown RBP10.28□□□□□ -0.76
TRIM6-207ENST00000481603 EHMT2Q96KQ7 1210 aa10.28□□□□□ -0.76
TRIM6-207ENST00000481603 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
TRIM6-207ENST00000481603 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
TRIM6-207ENST00000481603 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
TRIM6-207ENST00000481603 PPARGC1BQ86YN6 1023 aaKnown RBP10.24□□□□□ -0.77
TRIM6-207ENST00000481603 CHD1O14646 1710 aa10.23□□□□□ -0.77
TRIM6-207ENST00000481603 EEA1Q15075 1411 aa10.22□□□□□ -0.77
TRIM6-207ENST00000481603 SOGA1O94964 1423 aa10.21□□□□□ -0.77
TRIM6-207ENST00000481603 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
TRIM6-207ENST00000481603 SYNJ1O43426 1573 aa10.2□□□□□ -0.78
TRIM6-207ENST00000481603 ARAP1Q96P48 1450 aa10.2□□□□□ -0.78
TRIM6-207ENST00000481603 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
TRIM6-207ENST00000481603 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
TRIM6-207ENST00000481603 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
TRIM6-207ENST00000481603 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
TRIM6-207ENST00000481603 CLASP1Q7Z460 1538 aa10.16□□□□□ -0.78
TRIM6-207ENST00000481603 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRIM6-207ENST00000481603 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
TRIM6-207ENST00000481603 KIF21BO75037 1637 aa10.14□□□□□ -0.79
TRIM6-207ENST00000481603 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
TRIM6-207ENST00000481603 ZEB1P37275 1124 aaPredicted RBP10.13□□□□□ -0.79
TRIM6-207ENST00000481603 CYB5RLQ6IPT4 315 aa10.13□□□□□ -0.79
TRIM6-207ENST00000481603 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
TRIM6-207ENST00000481603 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
TRIM6-207ENST00000481603 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms