RNA–Protein interactions for RNA: ENST00000481458.1

CHAF1B-203, Transcript of chromatin assembly factor 1 subunit B, humanhuman

TSL 2

Gene CHAF1B, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1B-203ENST00000481458 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
CHAF1B-203ENST00000481458 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
CHAF1B-203ENST00000481458 ABCC9O60706 1549 aa24.85■■□□□ 1.57
CHAF1B-203ENST00000481458 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
CHAF1B-203ENST00000481458 NACADO15069 1562 aa24.09■■□□□ 1.45
CHAF1B-203ENST00000481458 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
CHAF1B-203ENST00000481458 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
CHAF1B-203ENST00000481458 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
CHAF1B-203ENST00000481458 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
CHAF1B-203ENST00000481458 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
CHAF1B-203ENST00000481458 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
CHAF1B-203ENST00000481458 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
CHAF1B-203ENST00000481458 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
CHAF1B-203ENST00000481458 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHAF1B-203ENST00000481458 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
CHAF1B-203ENST00000481458 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
CHAF1B-203ENST00000481458 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
CHAF1B-203ENST00000481458 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
CHAF1B-203ENST00000481458 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
CHAF1B-203ENST00000481458 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
CHAF1B-203ENST00000481458 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
CHAF1B-203ENST00000481458 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
CHAF1B-203ENST00000481458 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
CHAF1B-203ENST00000481458 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
CHAF1B-203ENST00000481458 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
CHAF1B-203ENST00000481458 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
CHAF1B-203ENST00000481458 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
CHAF1B-203ENST00000481458 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
CHAF1B-203ENST00000481458 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
CHAF1B-203ENST00000481458 WIZO95785 1651 aa22.13■■□□□ 1.13
CHAF1B-203ENST00000481458 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
CHAF1B-203ENST00000481458 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
CHAF1B-203ENST00000481458 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
CHAF1B-203ENST00000481458 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
CHAF1B-203ENST00000481458 NESP48681 1621 aa21.6■■□□□ 1.05
CHAF1B-203ENST00000481458 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
CHAF1B-203ENST00000481458 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
CHAF1B-203ENST00000481458 CFTRP13569 1480 aa21.54■■□□□ 1.04
CHAF1B-203ENST00000481458 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
CHAF1B-203ENST00000481458 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
CHAF1B-203ENST00000481458 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
CHAF1B-203ENST00000481458 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
CHAF1B-203ENST00000481458 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
CHAF1B-203ENST00000481458 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
CHAF1B-203ENST00000481458 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
CHAF1B-203ENST00000481458 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
CHAF1B-203ENST00000481458 WDR62O43379 1518 aa21.14■□□□□ 0.97
CHAF1B-203ENST00000481458 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
CHAF1B-203ENST00000481458 CUX2O14529 1486 aa21.1■□□□□ 0.97
CHAF1B-203ENST00000481458 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
CHAF1B-203ENST00000481458 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
CHAF1B-203ENST00000481458 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.95
CHAF1B-203ENST00000481458 CUX1P39880 1505 aa20.98■□□□□ 0.95
CHAF1B-203ENST00000481458 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
CHAF1B-203ENST00000481458 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
CHAF1B-203ENST00000481458 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
CHAF1B-203ENST00000481458 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
CHAF1B-203ENST00000481458 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
CHAF1B-203ENST00000481458 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
CHAF1B-203ENST00000481458 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
CHAF1B-203ENST00000481458 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
CHAF1B-203ENST00000481458 SOGA1O94964 1423 aa20.78■□□□□ 0.92
CHAF1B-203ENST00000481458 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
CHAF1B-203ENST00000481458 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
CHAF1B-203ENST00000481458 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
CHAF1B-203ENST00000481458 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
CHAF1B-203ENST00000481458 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
CHAF1B-203ENST00000481458 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■■■■ 33.2
CHAF1B-203ENST00000481458 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
CHAF1B-203ENST00000481458 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
CHAF1B-203ENST00000481458 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
CHAF1B-203ENST00000481458 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
CHAF1B-203ENST00000481458 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
CHAF1B-203ENST00000481458 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
CHAF1B-203ENST00000481458 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
CHAF1B-203ENST00000481458 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
CHAF1B-203ENST00000481458 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
CHAF1B-203ENST00000481458 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
CHAF1B-203ENST00000481458 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
CHAF1B-203ENST00000481458 IGF1RP08069 1367 aa20.37■□□□□ 0.85
CHAF1B-203ENST00000481458 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
CHAF1B-203ENST00000481458 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
CHAF1B-203ENST00000481458 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
CHAF1B-203ENST00000481458 CHD1O14646 1710 aa20.3■□□□□ 0.84
CHAF1B-203ENST00000481458 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
CHAF1B-203ENST00000481458 CUL7Q14999 1698 aa20.27■□□□□ 0.84
CHAF1B-203ENST00000481458 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
CHAF1B-203ENST00000481458 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CHAF1B-203ENST00000481458 EEA1Q15075 1411 aa20.25■□□□□ 0.83
CHAF1B-203ENST00000481458 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
CHAF1B-203ENST00000481458 FBLN2P98095 1184 aa20.24■□□□□ 0.83
CHAF1B-203ENST00000481458 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
CHAF1B-203ENST00000481458 NUP160Q12769 1436 aa20.18■□□□□ 0.82
CHAF1B-203ENST00000481458 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
CHAF1B-203ENST00000481458 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
CHAF1B-203ENST00000481458 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
CHAF1B-203ENST00000481458 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
CHAF1B-203ENST00000481458 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
CHAF1B-203ENST00000481458 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
CHAF1B-203ENST00000481458 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms