RNA–Protein interactions for RNA: ENST00000481331.1

ATXN2-208, Transcript of ataxin 2, humanhuman

TSL 3

Gene ATXN2, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-208ENST00000481331 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
ATXN2-208ENST00000481331 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
ATXN2-208ENST00000481331 NISCHQ9Y2I1 1504 aa18.89■□□□□ 0.61
ATXN2-208ENST00000481331 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
ATXN2-208ENST00000481331 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
ATXN2-208ENST00000481331 FOXD1Q16676 465 aa17.5■□□□□ 0.39
ATXN2-208ENST00000481331 POTEDQ86YR6 584 aa17■□□□□ 0.31
ATXN2-208ENST00000481331 CCDC180Q9P1Z9 1646 aa16.82■□□□□ 0.28
ATXN2-208ENST00000481331 ABCC9O60706 1549 aa16.49■□□□□ 0.23
ATXN2-208ENST00000481331 MSH5O43196 834 aa16.38■□□□□ 0.21
ATXN2-208ENST00000481331 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
ATXN2-208ENST00000481331 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
ATXN2-208ENST00000481331 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
ATXN2-208ENST00000481331 ADRA2BP18089 450 aa16.02■□□□□ 0.16
ATXN2-208ENST00000481331 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
ATXN2-208ENST00000481331 NACADO15069 1562 aa15.88■□□□□ 0.13
ATXN2-208ENST00000481331 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
ATXN2-208ENST00000481331 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
ATXN2-208ENST00000481331 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.11
ATXN2-208ENST00000481331 DCAF1Q9Y4B6 1507 aa15.69■□□□□ 0.1
ATXN2-208ENST00000481331 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATXN2-208ENST00000481331 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
ATXN2-208ENST00000481331 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
ATXN2-208ENST00000481331 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
ATXN2-208ENST00000481331 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
ATXN2-208ENST00000481331 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
ATXN2-208ENST00000481331 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
ATXN2-208ENST00000481331 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
ATXN2-208ENST00000481331 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
ATXN2-208ENST00000481331 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
ATXN2-208ENST00000481331 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
ATXN2-208ENST00000481331 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
ATXN2-208ENST00000481331 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
ATXN2-208ENST00000481331 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
ATXN2-208ENST00000481331 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
ATXN2-208ENST00000481331 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
ATXN2-208ENST00000481331 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
ATXN2-208ENST00000481331 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
ATXN2-208ENST00000481331 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
ATXN2-208ENST00000481331 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
ATXN2-208ENST00000481331 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
ATXN2-208ENST00000481331 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
ATXN2-208ENST00000481331 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
ATXN2-208ENST00000481331 WIZO95785 1651 aa14.3□□□□□ -0.12
ATXN2-208ENST00000481331 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
ATXN2-208ENST00000481331 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
ATXN2-208ENST00000481331 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
ATXN2-208ENST00000481331 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
ATXN2-208ENST00000481331 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
ATXN2-208ENST00000481331 NESP48681 1621 aa14.22□□□□□ -0.13
ATXN2-208ENST00000481331 CUX2O14529 1486 aa14.21□□□□□ -0.13
ATXN2-208ENST00000481331 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
ATXN2-208ENST00000481331 CFTRP13569 1480 aa14.12□□□□□ -0.15
ATXN2-208ENST00000481331 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
ATXN2-208ENST00000481331 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
ATXN2-208ENST00000481331 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
ATXN2-208ENST00000481331 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
ATXN2-208ENST00000481331 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
ATXN2-208ENST00000481331 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
ATXN2-208ENST00000481331 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
ATXN2-208ENST00000481331 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
ATXN2-208ENST00000481331 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
ATXN2-208ENST00000481331 WDR62O43379 1518 aa13.98□□□□□ -0.17
ATXN2-208ENST00000481331 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
ATXN2-208ENST00000481331 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
ATXN2-208ENST00000481331 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
ATXN2-208ENST00000481331 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
ATXN2-208ENST00000481331 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
ATXN2-208ENST00000481331 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
ATXN2-208ENST00000481331 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
ATXN2-208ENST00000481331 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
ATXN2-208ENST00000481331 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
ATXN2-208ENST00000481331 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
ATXN2-208ENST00000481331 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
ATXN2-208ENST00000481331 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
ATXN2-208ENST00000481331 SOGA1O94964 1423 aa13.64□□□□□ -0.23
ATXN2-208ENST00000481331 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
ATXN2-208ENST00000481331 CUX1P39880 1505 aa13.62□□□□□ -0.23
ATXN2-208ENST00000481331 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
ATXN2-208ENST00000481331 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
ATXN2-208ENST00000481331 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
ATXN2-208ENST00000481331 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
ATXN2-208ENST00000481331 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.241e-9■■■■□ 22.4
ATXN2-208ENST00000481331 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
ATXN2-208ENST00000481331 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
ATXN2-208ENST00000481331 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
ATXN2-208ENST00000481331 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
ATXN2-208ENST00000481331 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
ATXN2-208ENST00000481331 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
ATXN2-208ENST00000481331 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
ATXN2-208ENST00000481331 BIVM-ERCC5R4GMW8 1640 aa13.48□□□□□ -0.25
ATXN2-208ENST00000481331 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
ATXN2-208ENST00000481331 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
ATXN2-208ENST00000481331 FBLN2P98095 1184 aa13.44□□□□□ -0.26
ATXN2-208ENST00000481331 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
ATXN2-208ENST00000481331 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
ATXN2-208ENST00000481331 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
ATXN2-208ENST00000481331 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
ATXN2-208ENST00000481331 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
ATXN2-208ENST00000481331 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms