RNA–Protein interactions for RNA: ENST00000481285.5

LONRF3-206, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 2

Gene LONRF3, Length 2,895 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-206ENST00000481285 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
LONRF3-206ENST00000481285 CCDC180Q9P1Z9 1646 aa31.63■■■□□ 2.65
LONRF3-206ENST00000481285 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
LONRF3-206ENST00000481285 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
LONRF3-206ENST00000481285 DCAF8L2P0C7V8 631 aa30.46■■■□□ 2.47
LONRF3-206ENST00000481285 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
LONRF3-206ENST00000481285 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
LONRF3-206ENST00000481285 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
LONRF3-206ENST00000481285 ABCC9O60706 1549 aa29.48■■■□□ 2.31
LONRF3-206ENST00000481285 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
LONRF3-206ENST00000481285 NACADO15069 1562 aa29.32■■■□□ 2.28
LONRF3-206ENST00000481285 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
LONRF3-206ENST00000481285 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
LONRF3-206ENST00000481285 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
LONRF3-206ENST00000481285 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
LONRF3-206ENST00000481285 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
LONRF3-206ENST00000481285 UNC13AQ9UPW8 1703 aa28.41■■■□□ 2.14
LONRF3-206ENST00000481285 WIZO95785 1651 aa28.36■■■□□ 2.13
LONRF3-206ENST00000481285 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
LONRF3-206ENST00000481285 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
LONRF3-206ENST00000481285 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
LONRF3-206ENST00000481285 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
LONRF3-206ENST00000481285 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
LONRF3-206ENST00000481285 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
LONRF3-206ENST00000481285 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
LONRF3-206ENST00000481285 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
LONRF3-206ENST00000481285 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
LONRF3-206ENST00000481285 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
LONRF3-206ENST00000481285 PPARGC1BQ86YN6 1023 aaKnown RBP27.79■■■□□ 2.04
LONRF3-206ENST00000481285 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
LONRF3-206ENST00000481285 FAM9AQ8IZU1 332 aaPredicted RBP27.75■■■□□ 2.03
LONRF3-206ENST00000481285 HRCP23327 699 aa27.69■■■□□ 2.02
LONRF3-206ENST00000481285 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
LONRF3-206ENST00000481285 ABCC8Q09428 1581 aa27.53■■■□□ 2
LONRF3-206ENST00000481285 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
LONRF3-206ENST00000481285 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.99
LONRF3-206ENST00000481285 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
LONRF3-206ENST00000481285 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
LONRF3-206ENST00000481285 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
LONRF3-206ENST00000481285 SOGA1O94964 1423 aa27.16■■□□□ 1.94
LONRF3-206ENST00000481285 EEA1Q15075 1411 aa27.13■■□□□ 1.93
LONRF3-206ENST00000481285 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
LONRF3-206ENST00000481285 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
LONRF3-206ENST00000481285 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
LONRF3-206ENST00000481285 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
LONRF3-206ENST00000481285 CSRNP3Q8WYN3 585 aa27.01■■□□□ 1.91
LONRF3-206ENST00000481285 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
LONRF3-206ENST00000481285 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
LONRF3-206ENST00000481285 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
LONRF3-206ENST00000481285 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
LONRF3-206ENST00000481285 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
LONRF3-206ENST00000481285 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
LONRF3-206ENST00000481285 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
LONRF3-206ENST00000481285 KIF21BO75037 1637 aa26.75■■□□□ 1.87
LONRF3-206ENST00000481285 CFTRP13569 1480 aa26.72■■□□□ 1.87
LONRF3-206ENST00000481285 CUX1P39880 1505 aa26.61■■□□□ 1.85
LONRF3-206ENST00000481285 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
LONRF3-206ENST00000481285 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
LONRF3-206ENST00000481285 PRDM2Q13029 1718 aa26.57■■□□□ 1.84
LONRF3-206ENST00000481285 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
LONRF3-206ENST00000481285 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
LONRF3-206ENST00000481285 CLIP1P30622 1438 aa26.5■■□□□ 1.83
LONRF3-206ENST00000481285 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
LONRF3-206ENST00000481285 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
LONRF3-206ENST00000481285 ERICH3Q5RHP9 1530 aa26.41■■□□□ 1.82
LONRF3-206ENST00000481285 PRXQ9BXM0 1461 aa26.4■■□□□ 1.82
LONRF3-206ENST00000481285 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
LONRF3-206ENST00000481285 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
LONRF3-206ENST00000481285 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
LONRF3-206ENST00000481285 CUX2O14529 1486 aa26.23■■□□□ 1.79
LONRF3-206ENST00000481285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.23■■□□□ 1.79
LONRF3-206ENST00000481285 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
LONRF3-206ENST00000481285 APLP2Q06481 763 aa26.21■■□□□ 1.79
LONRF3-206ENST00000481285 CCER1Q8TC90 406 aaPredicted RBP26.19■■□□□ 1.78
LONRF3-206ENST00000481285 NESP48681 1621 aa26.12■■□□□ 1.77
LONRF3-206ENST00000481285 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
LONRF3-206ENST00000481285 IGF1RP08069 1367 aa26.11■■□□□ 1.77
LONRF3-206ENST00000481285 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
LONRF3-206ENST00000481285 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
LONRF3-206ENST00000481285 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
LONRF3-206ENST00000481285 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
LONRF3-206ENST00000481285 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
LONRF3-206ENST00000481285 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
LONRF3-206ENST00000481285 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
LONRF3-206ENST00000481285 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
LONRF3-206ENST00000481285 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
LONRF3-206ENST00000481285 HNRNPUL2Q1KMD3 747 aaKnown RBP25.91■■□□□ 1.74
LONRF3-206ENST00000481285 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
LONRF3-206ENST00000481285 PDS5BQ9NTI5 1447 aa25.86■■□□□ 1.73
LONRF3-206ENST00000481285 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
LONRF3-206ENST00000481285 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
LONRF3-206ENST00000481285 CUL7Q14999 1698 aa25.78■■□□□ 1.72
LONRF3-206ENST00000481285 WDR97A6NE52 1622 aa25.76■■□□□ 1.71
LONRF3-206ENST00000481285 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
LONRF3-206ENST00000481285 ABCA5Q8WWZ7 1642 aa25.67■■□□□ 1.7
LONRF3-206ENST00000481285 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
LONRF3-206ENST00000481285 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
LONRF3-206ENST00000481285 RRBP1Q9P2E9 1410 aaKnown RBP25.65■■□□□ 1.7
LONRF3-206ENST00000481285 TIAM1Q13009 1591 aa25.64■■□□□ 1.7
LONRF3-206ENST00000481285 MAP3K1Q13233 1512 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms