RNA–Protein interactions for RNA: ENST00000481180.5

CCDC18-209, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 1,751 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-209ENST00000481180 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.67
CCDC18-209ENST00000481180 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
CCDC18-209ENST00000481180 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
CCDC18-209ENST00000481180 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
CCDC18-209ENST00000481180 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
CCDC18-209ENST00000481180 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
CCDC18-209ENST00000481180 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
CCDC18-209ENST00000481180 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
CCDC18-209ENST00000481180 ABCC9O60706 1549 aa20.51■□□□□ 0.87
CCDC18-209ENST00000481180 NACADO15069 1562 aa20.42■□□□□ 0.86
CCDC18-209ENST00000481180 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
CCDC18-209ENST00000481180 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.82
CCDC18-209ENST00000481180 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
CCDC18-209ENST00000481180 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
CCDC18-209ENST00000481180 CECR2Q9BXF3 1484 aa19.82■□□□□ 0.76
CCDC18-209ENST00000481180 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
CCDC18-209ENST00000481180 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
CCDC18-209ENST00000481180 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
CCDC18-209ENST00000481180 WIZO95785 1651 aa19.59■□□□□ 0.73
CCDC18-209ENST00000481180 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CCDC18-209ENST00000481180 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
CCDC18-209ENST00000481180 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCDC18-209ENST00000481180 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
CCDC18-209ENST00000481180 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
CCDC18-209ENST00000481180 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
CCDC18-209ENST00000481180 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
CCDC18-209ENST00000481180 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
CCDC18-209ENST00000481180 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
CCDC18-209ENST00000481180 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
CCDC18-209ENST00000481180 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
CCDC18-209ENST00000481180 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
CCDC18-209ENST00000481180 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
CCDC18-209ENST00000481180 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
CCDC18-209ENST00000481180 NCAPD3P42695 1498 aa18.85■□□□□ 0.61
CCDC18-209ENST00000481180 HMGXB3Q12766 1538 aa18.85■□□□□ 0.61
CCDC18-209ENST00000481180 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
CCDC18-209ENST00000481180 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
CCDC18-209ENST00000481180 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
CCDC18-209ENST00000481180 EEA1Q15075 1411 aa18.75■□□□□ 0.59
CCDC18-209ENST00000481180 SOGA1O94964 1423 aa18.72■□□□□ 0.59
CCDC18-209ENST00000481180 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
CCDC18-209ENST00000481180 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
CCDC18-209ENST00000481180 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
CCDC18-209ENST00000481180 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
CCDC18-209ENST00000481180 HRCP23327 699 aa18.6■□□□□ 0.57
CCDC18-209ENST00000481180 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
CCDC18-209ENST00000481180 CFTRP13569 1480 aa18.56■□□□□ 0.56
CCDC18-209ENST00000481180 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
CCDC18-209ENST00000481180 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
CCDC18-209ENST00000481180 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
CCDC18-209ENST00000481180 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
CCDC18-209ENST00000481180 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
CCDC18-209ENST00000481180 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
CCDC18-209ENST00000481180 KIF21BO75037 1637 aa18.46■□□□□ 0.55
CCDC18-209ENST00000481180 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
CCDC18-209ENST00000481180 CUX1P39880 1505 aa18.43■□□□□ 0.54
CCDC18-209ENST00000481180 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
CCDC18-209ENST00000481180 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
CCDC18-209ENST00000481180 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
CCDC18-209ENST00000481180 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
CCDC18-209ENST00000481180 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
CCDC18-209ENST00000481180 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
CCDC18-209ENST00000481180 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
CCDC18-209ENST00000481180 CLIP1P30622 1438 aa18.25■□□□□ 0.51
CCDC18-209ENST00000481180 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
CCDC18-209ENST00000481180 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
CCDC18-209ENST00000481180 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
CCDC18-209ENST00000481180 CUX2O14529 1486 aa18.15■□□□□ 0.5
CCDC18-209ENST00000481180 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.5
CCDC18-209ENST00000481180 NESP48681 1621 aa18.13■□□□□ 0.49
CCDC18-209ENST00000481180 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
CCDC18-209ENST00000481180 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
CCDC18-209ENST00000481180 IGF1RP08069 1367 aa18.08■□□□□ 0.49
CCDC18-209ENST00000481180 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
CCDC18-209ENST00000481180 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
CCDC18-209ENST00000481180 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
CCDC18-209ENST00000481180 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
CCDC18-209ENST00000481180 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
CCDC18-209ENST00000481180 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
CCDC18-209ENST00000481180 APLP2Q06481 763 aa18.01■□□□□ 0.47
CCDC18-209ENST00000481180 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
CCDC18-209ENST00000481180 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
CCDC18-209ENST00000481180 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
CCDC18-209ENST00000481180 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
CCDC18-209ENST00000481180 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
CCDC18-209ENST00000481180 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
CCDC18-209ENST00000481180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
CCDC18-209ENST00000481180 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
CCDC18-209ENST00000481180 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
CCDC18-209ENST00000481180 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
CCDC18-209ENST00000481180 CUL7Q14999 1698 aa17.86■□□□□ 0.45
CCDC18-209ENST00000481180 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
CCDC18-209ENST00000481180 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
CCDC18-209ENST00000481180 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
CCDC18-209ENST00000481180 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
CCDC18-209ENST00000481180 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
CCDC18-209ENST00000481180 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
CCDC18-209ENST00000481180 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
CCDC18-209ENST00000481180 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
CCDC18-209ENST00000481180 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms