RNA–Protein interactions for RNA: ENST00000480889.1

CACNA1F-204, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 5

Gene CACNA1F, Length 505 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-204ENST00000480889 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
CACNA1F-204ENST00000480889 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
CACNA1F-204ENST00000480889 ABCC9O60706 1549 aa24.05■■□□□ 1.44
CACNA1F-204ENST00000480889 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
CACNA1F-204ENST00000480889 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
CACNA1F-204ENST00000480889 NACADO15069 1562 aa23.45■■□□□ 1.34
CACNA1F-204ENST00000480889 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
CACNA1F-204ENST00000480889 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
CACNA1F-204ENST00000480889 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
CACNA1F-204ENST00000480889 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
CACNA1F-204ENST00000480889 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
CACNA1F-204ENST00000480889 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
CACNA1F-204ENST00000480889 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
CACNA1F-204ENST00000480889 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
CACNA1F-204ENST00000480889 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
CACNA1F-204ENST00000480889 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
CACNA1F-204ENST00000480889 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
CACNA1F-204ENST00000480889 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
CACNA1F-204ENST00000480889 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
CACNA1F-204ENST00000480889 DNAJC5BQ9UF47 199 aa21.75■■□□□ 1.07
CACNA1F-204ENST00000480889 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
CACNA1F-204ENST00000480889 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
CACNA1F-204ENST00000480889 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
CACNA1F-204ENST00000480889 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
CACNA1F-204ENST00000480889 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
CACNA1F-204ENST00000480889 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
CACNA1F-204ENST00000480889 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
CACNA1F-204ENST00000480889 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
CACNA1F-204ENST00000480889 WIZO95785 1651 aa21.46■■□□□ 1.03
CACNA1F-204ENST00000480889 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
CACNA1F-204ENST00000480889 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
CACNA1F-204ENST00000480889 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
CACNA1F-204ENST00000480889 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
CACNA1F-204ENST00000480889 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
CACNA1F-204ENST00000480889 CFTRP13569 1480 aa20.93■□□□□ 0.94
CACNA1F-204ENST00000480889 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
CACNA1F-204ENST00000480889 NESP48681 1621 aa20.87■□□□□ 0.93
CACNA1F-204ENST00000480889 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
CACNA1F-204ENST00000480889 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
CACNA1F-204ENST00000480889 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
CACNA1F-204ENST00000480889 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
CACNA1F-204ENST00000480889 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
CACNA1F-204ENST00000480889 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
CACNA1F-204ENST00000480889 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
CACNA1F-204ENST00000480889 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
CACNA1F-204ENST00000480889 CUX2O14529 1486 aa20.5■□□□□ 0.87
CACNA1F-204ENST00000480889 WDR62O43379 1518 aa20.49■□□□□ 0.87
CACNA1F-204ENST00000480889 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
CACNA1F-204ENST00000480889 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
CACNA1F-204ENST00000480889 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
CACNA1F-204ENST00000480889 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
CACNA1F-204ENST00000480889 CUX1P39880 1505 aa20.33■□□□□ 0.85
CACNA1F-204ENST00000480889 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
CACNA1F-204ENST00000480889 BIVM-ERCC5R4GMW8 1640 aa20.28■□□□□ 0.84
CACNA1F-204ENST00000480889 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
CACNA1F-204ENST00000480889 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
CACNA1F-204ENST00000480889 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
CACNA1F-204ENST00000480889 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
CACNA1F-204ENST00000480889 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
CACNA1F-204ENST00000480889 SOGA1O94964 1423 aa20.21■□□□□ 0.83
CACNA1F-204ENST00000480889 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
CACNA1F-204ENST00000480889 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
CACNA1F-204ENST00000480889 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
CACNA1F-204ENST00000480889 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
CACNA1F-204ENST00000480889 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
CACNA1F-204ENST00000480889 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
CACNA1F-204ENST00000480889 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
CACNA1F-204ENST00000480889 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
CACNA1F-204ENST00000480889 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
CACNA1F-204ENST00000480889 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
CACNA1F-204ENST00000480889 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
CACNA1F-204ENST00000480889 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
CACNA1F-204ENST00000480889 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
CACNA1F-204ENST00000480889 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
CACNA1F-204ENST00000480889 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
CACNA1F-204ENST00000480889 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
CACNA1F-204ENST00000480889 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
CACNA1F-204ENST00000480889 EEA1Q15075 1411 aa19.85■□□□□ 0.77
CACNA1F-204ENST00000480889 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
CACNA1F-204ENST00000480889 IGF1RP08069 1367 aa19.81■□□□□ 0.76
CACNA1F-204ENST00000480889 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
CACNA1F-204ENST00000480889 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
CACNA1F-204ENST00000480889 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
CACNA1F-204ENST00000480889 CUL7Q14999 1698 aa19.77■□□□□ 0.76
CACNA1F-204ENST00000480889 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
CACNA1F-204ENST00000480889 FBLN2P98095 1184 aa19.72■□□□□ 0.75
CACNA1F-204ENST00000480889 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
CACNA1F-204ENST00000480889 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
CACNA1F-204ENST00000480889 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
CACNA1F-204ENST00000480889 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
CACNA1F-204ENST00000480889 CHD1O14646 1710 aa19.69■□□□□ 0.74
CACNA1F-204ENST00000480889 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
CACNA1F-204ENST00000480889 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
CACNA1F-204ENST00000480889 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
CACNA1F-204ENST00000480889 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.72
CACNA1F-204ENST00000480889 NUP160Q12769 1436 aa19.58■□□□□ 0.72
CACNA1F-204ENST00000480889 KIF21BO75037 1637 aa19.52■□□□□ 0.72
CACNA1F-204ENST00000480889 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
CACNA1F-204ENST00000480889 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
CACNA1F-204ENST00000480889 CLASP1Q7Z460 1538 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms