RNA–Protein interactions for RNA: ENST00000479106.1

CPA1-205, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 1,931 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-205ENST00000479106 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
CPA1-205ENST00000479106 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
CPA1-205ENST00000479106 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
CPA1-205ENST00000479106 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
CPA1-205ENST00000479106 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
CPA1-205ENST00000479106 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
CPA1-205ENST00000479106 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
CPA1-205ENST00000479106 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
CPA1-205ENST00000479106 NACADO15069 1562 aa30.61■■■□□ 2.49
CPA1-205ENST00000479106 ABCC9O60706 1549 aa30.52■■■□□ 2.48
CPA1-205ENST00000479106 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
CPA1-205ENST00000479106 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
CPA1-205ENST00000479106 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
CPA1-205ENST00000479106 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
CPA1-205ENST00000479106 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
CPA1-205ENST00000479106 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
CPA1-205ENST00000479106 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
CPA1-205ENST00000479106 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
CPA1-205ENST00000479106 WIZO95785 1651 aa29.47■■■□□ 2.31
CPA1-205ENST00000479106 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
CPA1-205ENST00000479106 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
CPA1-205ENST00000479106 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
CPA1-205ENST00000479106 EIF4G1Q04637 1599 aaKnown RBP29.08■■■□□ 2.25
CPA1-205ENST00000479106 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
CPA1-205ENST00000479106 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
CPA1-205ENST00000479106 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
CPA1-205ENST00000479106 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
CPA1-205ENST00000479106 LOC105371045A0A1W2PR82 267 aa28.86■■■□□ 2.21
CPA1-205ENST00000479106 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
CPA1-205ENST00000479106 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
CPA1-205ENST00000479106 ABCC8Q09428 1581 aa28.51■■■□□ 2.16
CPA1-205ENST00000479106 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
CPA1-205ENST00000479106 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
CPA1-205ENST00000479106 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
CPA1-205ENST00000479106 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
CPA1-205ENST00000479106 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
CPA1-205ENST00000479106 EEA1Q15075 1411 aa28.2■■■□□ 2.11
CPA1-205ENST00000479106 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.1
CPA1-205ENST00000479106 HRCP23327 699 aa28.19■■■□□ 2.1
CPA1-205ENST00000479106 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
CPA1-205ENST00000479106 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
CPA1-205ENST00000479106 SOGA1O94964 1423 aa28.1■■■□□ 2.09
CPA1-205ENST00000479106 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
CPA1-205ENST00000479106 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
CPA1-205ENST00000479106 TOP2BQ02880 1626 aa27.94■■■□□ 2.06
CPA1-205ENST00000479106 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
CPA1-205ENST00000479106 CSRNP3Q8WYN3 585 aa27.92■■■□□ 2.06
CPA1-205ENST00000479106 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
CPA1-205ENST00000479106 KIF21BO75037 1637 aa27.87■■■□□ 2.05
CPA1-205ENST00000479106 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
CPA1-205ENST00000479106 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
CPA1-205ENST00000479106 CFTRP13569 1480 aa27.82■■■□□ 2.04
CPA1-205ENST00000479106 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
CPA1-205ENST00000479106 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
CPA1-205ENST00000479106 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
CPA1-205ENST00000479106 CUX1P39880 1505 aa27.67■■■□□ 2.02
CPA1-205ENST00000479106 UBTFP17480 764 aaKnown RBP27.59■■■□□ 2.01
CPA1-205ENST00000479106 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
CPA1-205ENST00000479106 ERICH3Q5RHP9 1530 aa27.52■■■□□ 2
CPA1-205ENST00000479106 RAPGEF2Q9Y4G8 1499 aa27.52■■■□□ 2
CPA1-205ENST00000479106 PRXQ9BXM0 1461 aa27.46■■□□□ 1.99
CPA1-205ENST00000479106 ZEB1P37275 1124 aaPredicted RBP27.42■■□□□ 1.98
CPA1-205ENST00000479106 CLIP1P30622 1438 aa27.41■■□□□ 1.98
CPA1-205ENST00000479106 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
CPA1-205ENST00000479106 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.98
CPA1-205ENST00000479106 VPS8Q8N3P4 1428 aa27.31■■□□□ 1.96
CPA1-205ENST00000479106 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
CPA1-205ENST00000479106 FGD5Q6ZNL6 1462 aa27.22■■□□□ 1.95
CPA1-205ENST00000479106 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
CPA1-205ENST00000479106 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
CPA1-205ENST00000479106 CUX2O14529 1486 aa27.16■■□□□ 1.94
CPA1-205ENST00000479106 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
CPA1-205ENST00000479106 IGF1RP08069 1367 aa27.09■■□□□ 1.93
CPA1-205ENST00000479106 NESP48681 1621 aa27.08■■□□□ 1.92
CPA1-205ENST00000479106 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
CPA1-205ENST00000479106 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
CPA1-205ENST00000479106 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
CPA1-205ENST00000479106 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
CPA1-205ENST00000479106 WDR97A6NE52 1622 aa26.95■■□□□ 1.9
CPA1-205ENST00000479106 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
CPA1-205ENST00000479106 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.9
CPA1-205ENST00000479106 APLP2Q06481 763 aa26.92■■□□□ 1.9
CPA1-205ENST00000479106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
CPA1-205ENST00000479106 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
CPA1-205ENST00000479106 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.89
CPA1-205ENST00000479106 CUL7Q14999 1698 aa26.88■■□□□ 1.89
CPA1-205ENST00000479106 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
CPA1-205ENST00000479106 CCER1Q8TC90 406 aaPredicted RBP26.87■■□□□ 1.89
CPA1-205ENST00000479106 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
CPA1-205ENST00000479106 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
CPA1-205ENST00000479106 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
CPA1-205ENST00000479106 MAP3K1Q13233 1512 aa26.74■■□□□ 1.87
CPA1-205ENST00000479106 CTTNBP2Q8WZ74 1663 aa26.74■■□□□ 1.87
CPA1-205ENST00000479106 DNAJC5BQ9UF47 199 aa26.73■■□□□ 1.87
CPA1-205ENST00000479106 EFCAB5A4FU69 1503 aa26.66■■□□□ 1.86
CPA1-205ENST00000479106 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
CPA1-205ENST00000479106 KANK4Q5T7N3 995 aaPredicted RBP26.65■■□□□ 1.86
CPA1-205ENST00000479106 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.86
CPA1-205ENST00000479106 TIAM1Q13009 1591 aa26.64■■□□□ 1.86
CPA1-205ENST00000479106 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms