RNA–Protein interactions for RNA: ENST00000478405.1

SPIN3-203, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 1,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-203ENST00000478405 NISCHQ9Y2I1 1504 aa41.89■■■■■ 4.3
SPIN3-203ENST00000478405 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
SPIN3-203ENST00000478405 ABCC9O60706 1549 aa36.07■■■■□ 3.37
SPIN3-203ENST00000478405 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
SPIN3-203ENST00000478405 ZCCHC6Q5VYS8 1495 aaKnown RBP34.92■■■■□ 3.18
SPIN3-203ENST00000478405 NACADO15069 1562 aa34.76■■■■□ 3.16
SPIN3-203ENST00000478405 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
SPIN3-203ENST00000478405 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
SPIN3-203ENST00000478405 DCAF1Q9Y4B6 1507 aa34.62■■■■□ 3.13
SPIN3-203ENST00000478405 PABPN1Q86U42 306 aaKnown RBP eCLIP33.89■■■■□ 3.02
SPIN3-203ENST00000478405 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
SPIN3-203ENST00000478405 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
SPIN3-203ENST00000478405 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
SPIN3-203ENST00000478405 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
SPIN3-203ENST00000478405 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
SPIN3-203ENST00000478405 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
SPIN3-203ENST00000478405 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
SPIN3-203ENST00000478405 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
SPIN3-203ENST00000478405 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
SPIN3-203ENST00000478405 SMARCA4P51532 1647 aa32.36■■■□□ 2.77
SPIN3-203ENST00000478405 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
SPIN3-203ENST00000478405 ATAD2BQ9ULI0 1458 aa32.22■■■□□ 2.75
SPIN3-203ENST00000478405 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
SPIN3-203ENST00000478405 SMARCA2P51531 1590 aa32.12■■■□□ 2.73
SPIN3-203ENST00000478405 RSF1Q96T23 1441 aaPredicted RBP32.1■■■□□ 2.73
SPIN3-203ENST00000478405 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
SPIN3-203ENST00000478405 BAZ1BQ9UIG0 1483 aaKnown RBP31.94■■■□□ 2.7
SPIN3-203ENST00000478405 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
SPIN3-203ENST00000478405 WIZO95785 1651 aa31.91■■■□□ 2.7
SPIN3-203ENST00000478405 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
SPIN3-203ENST00000478405 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
SPIN3-203ENST00000478405 CCDC88BA6NC98 1476 aa31.31■■■□□ 2.6
SPIN3-203ENST00000478405 NESP48681 1621 aa31.3■■■□□ 2.6
SPIN3-203ENST00000478405 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
SPIN3-203ENST00000478405 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
SPIN3-203ENST00000478405 CFTRP13569 1480 aa31.11■■■□□ 2.57
SPIN3-203ENST00000478405 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
SPIN3-203ENST00000478405 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
SPIN3-203ENST00000478405 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
SPIN3-203ENST00000478405 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
SPIN3-203ENST00000478405 KIF21AQ7Z4S6 1674 aa30.77■■■□□ 2.52
SPIN3-203ENST00000478405 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
SPIN3-203ENST00000478405 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
SPIN3-203ENST00000478405 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
SPIN3-203ENST00000478405 CUX2O14529 1486 aa30.56■■■□□ 2.48
SPIN3-203ENST00000478405 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
SPIN3-203ENST00000478405 WDR62O43379 1518 aa30.5■■■□□ 2.47
SPIN3-203ENST00000478405 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
SPIN3-203ENST00000478405 TOPBP1Q92547 1522 aa30.39■■■□□ 2.45
SPIN3-203ENST00000478405 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
SPIN3-203ENST00000478405 CUX1P39880 1505 aa30.27■■■□□ 2.44
SPIN3-203ENST00000478405 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
SPIN3-203ENST00000478405 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
SPIN3-203ENST00000478405 IFT140Q96RY7 1462 aa30.13■■■□□ 2.41
SPIN3-203ENST00000478405 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
SPIN3-203ENST00000478405 SOGA1O94964 1423 aa30.12■■■□□ 2.41
SPIN3-203ENST00000478405 RAD54L2Q9Y4B4 1467 aa30.08■■■□□ 2.41
SPIN3-203ENST00000478405 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
SPIN3-203ENST00000478405 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
SPIN3-203ENST00000478405 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
SPIN3-203ENST00000478405 BIVM-ERCC5R4GMW8 1640 aa29.97■■■□□ 2.39
SPIN3-203ENST00000478405 TARBP1Q13395 1621 aaKnown RBP29.97■■■□□ 2.39
SPIN3-203ENST00000478405 TDRD9Q8NDG6 1382 aaKnown RBP29.95■■■□□ 2.38
SPIN3-203ENST00000478405 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
SPIN3-203ENST00000478405 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
SPIN3-203ENST00000478405 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
SPIN3-203ENST00000478405 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
SPIN3-203ENST00000478405 GAPVD1Q14C86 1478 aa29.73■■■□□ 2.35
SPIN3-203ENST00000478405 WDR97A6NE52 1622 aa29.7■■■□□ 2.34
SPIN3-203ENST00000478405 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
SPIN3-203ENST00000478405 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
SPIN3-203ENST00000478405 ABCA5Q8WWZ7 1642 aa29.61■■■□□ 2.33
SPIN3-203ENST00000478405 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
SPIN3-203ENST00000478405 FBLN2P98095 1184 aa29.59■■■□□ 2.33
SPIN3-203ENST00000478405 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
SPIN3-203ENST00000478405 CHMP7Q8WUX9 453 aaPredicted RBP29.53■■■□□ 2.32
SPIN3-203ENST00000478405 OSCARQ8IYS5 282 aa29.53■■■□□ 2.32
SPIN3-203ENST00000478405 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
SPIN3-203ENST00000478405 IGF1RP08069 1367 aa29.5■■■□□ 2.31
SPIN3-203ENST00000478405 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
SPIN3-203ENST00000478405 PBRM1Q86U86 1689 aa29.45■■■□□ 2.31
SPIN3-203ENST00000478405 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
SPIN3-203ENST00000478405 DNAJC5Q9H3Z4 198 aa29.43■■■□□ 2.3
SPIN3-203ENST00000478405 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
SPIN3-203ENST00000478405 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
SPIN3-203ENST00000478405 CARMIL1Q5VZK9 1371 aa29.31■■■□□ 2.28
SPIN3-203ENST00000478405 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
SPIN3-203ENST00000478405 CHD1O14646 1710 aa29.28■■■□□ 2.28
SPIN3-203ENST00000478405 FAM9AQ8IZU1 332 aaPredicted RBP29.27■■■□□ 2.28
SPIN3-203ENST00000478405 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
SPIN3-203ENST00000478405 CSRNP3Q8WYN3 585 aa29.25■■■□□ 2.27
SPIN3-203ENST00000478405 EEA1Q15075 1411 aa29.19■■■□□ 2.26
SPIN3-203ENST00000478405 CUL7Q14999 1698 aa29.18■■■□□ 2.26
SPIN3-203ENST00000478405 NUP160Q12769 1436 aa29.13■■■□□ 2.25
SPIN3-203ENST00000478405 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
SPIN3-203ENST00000478405 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
SPIN3-203ENST00000478405 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
SPIN3-203ENST00000478405 CLASP1Q7Z460 1538 aa29.05■■■□□ 2.24
SPIN3-203ENST00000478405 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
SPIN3-203ENST00000478405 KIAA0586Q9BVV6 1533 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms