RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 NISCHQ9Y2I1 1504 aa43.41■■■■■ 4.54
PLOD3-213ENST00000478264 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
PLOD3-213ENST00000478264 ABCC9O60706 1549 aa37.08■■■■□ 3.53
PLOD3-213ENST00000478264 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
PLOD3-213ENST00000478264 NACADO15069 1562 aa35.99■■■■□ 3.35
PLOD3-213ENST00000478264 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
PLOD3-213ENST00000478264 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
PLOD3-213ENST00000478264 MYO15BQ96JP2 1530 aa35.96■■■■□ 3.35
PLOD3-213ENST00000478264 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
PLOD3-213ENST00000478264 UNC13AQ9UPW8 1703 aa35.09■■■■□ 3.21
PLOD3-213ENST00000478264 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
PLOD3-213ENST00000478264 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
PLOD3-213ENST00000478264 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.14
PLOD3-213ENST00000478264 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
PLOD3-213ENST00000478264 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
PLOD3-213ENST00000478264 CECR2Q9BXF3 1484 aa33.72■■■□□ 2.99
PLOD3-213ENST00000478264 BAZ1AQ9NRL2 1556 aaPredicted RBP33.64■■■□□ 2.98
PLOD3-213ENST00000478264 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
PLOD3-213ENST00000478264 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
PLOD3-213ENST00000478264 DNAJC5BQ9UF47 199 aa33.52■■■□□ 2.96
PLOD3-213ENST00000478264 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
PLOD3-213ENST00000478264 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
PLOD3-213ENST00000478264 ATAD2BQ9ULI0 1458 aa33.28■■■□□ 2.92
PLOD3-213ENST00000478264 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
PLOD3-213ENST00000478264 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
PLOD3-213ENST00000478264 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
PLOD3-213ENST00000478264 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
PLOD3-213ENST00000478264 WIZO95785 1651 aa33.1■■■□□ 2.89
PLOD3-213ENST00000478264 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
PLOD3-213ENST00000478264 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
PLOD3-213ENST00000478264 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
PLOD3-213ENST00000478264 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
PLOD3-213ENST00000478264 LAMC3Q9Y6N6 1575 aa32.27■■■□□ 2.76
PLOD3-213ENST00000478264 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
PLOD3-213ENST00000478264 NESP48681 1621 aa32.22■■■□□ 2.75
PLOD3-213ENST00000478264 CFTRP13569 1480 aa32.16■■■□□ 2.74
PLOD3-213ENST00000478264 PDS5BQ9NTI5 1447 aa32.01■■■□□ 2.72
PLOD3-213ENST00000478264 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
PLOD3-213ENST00000478264 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
PLOD3-213ENST00000478264 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
PLOD3-213ENST00000478264 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
PLOD3-213ENST00000478264 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.68
PLOD3-213ENST00000478264 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
PLOD3-213ENST00000478264 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
PLOD3-213ENST00000478264 WDR62O43379 1518 aa31.56■■■□□ 2.64
PLOD3-213ENST00000478264 URB2Q14146 1524 aaKnown RBP31.52■■■□□ 2.64
PLOD3-213ENST00000478264 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
PLOD3-213ENST00000478264 CUX2O14529 1486 aa31.46■■■□□ 2.63
PLOD3-213ENST00000478264 DNMBPQ6XZF7 1577 aa31.45■■■□□ 2.63
PLOD3-213ENST00000478264 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
PLOD3-213ENST00000478264 CUX1P39880 1505 aa31.35■■■□□ 2.61
PLOD3-213ENST00000478264 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
PLOD3-213ENST00000478264 SYNJ1O43426 1573 aa31.24■■■□□ 2.59
PLOD3-213ENST00000478264 TOP2BQ02880 1626 aa31.24■■■□□ 2.59
PLOD3-213ENST00000478264 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
PLOD3-213ENST00000478264 POLA1P09884 1462 aaPredicted RBP31.2■■■□□ 2.58
PLOD3-213ENST00000478264 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
PLOD3-213ENST00000478264 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
PLOD3-213ENST00000478264 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
PLOD3-213ENST00000478264 SOGA1O94964 1423 aa31.04■■■□□ 2.56
PLOD3-213ENST00000478264 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
PLOD3-213ENST00000478264 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
PLOD3-213ENST00000478264 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
PLOD3-213ENST00000478264 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
PLOD3-213ENST00000478264 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
PLOD3-213ENST00000478264 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
PLOD3-213ENST00000478264 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
PLOD3-213ENST00000478264 CHIC1Q5VXU3 224 aa30.79■■■□□ 2.52
PLOD3-213ENST00000478264 AQRO60306 1485 aaKnown RBP eCLIP30.78■■■□□ 2.52
PLOD3-213ENST00000478264 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.52
PLOD3-213ENST00000478264 GAPVD1Q14C86 1478 aa30.71■■■□□ 2.51
PLOD3-213ENST00000478264 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
PLOD3-213ENST00000478264 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
PLOD3-213ENST00000478264 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
PLOD3-213ENST00000478264 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
PLOD3-213ENST00000478264 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.48
PLOD3-213ENST00000478264 SNAPC4Q5SXM2 1469 aa30.56■■■□□ 2.48
PLOD3-213ENST00000478264 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
PLOD3-213ENST00000478264 RUSC2Q8N2Y8 1516 aa30.46■■■□□ 2.47
PLOD3-213ENST00000478264 ADAMTS12P58397 1594 aa30.45■■■□□ 2.46
PLOD3-213ENST00000478264 IGF1RP08069 1367 aa30.42■■■□□ 2.46
PLOD3-213ENST00000478264 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
PLOD3-213ENST00000478264 EEA1Q15075 1411 aa30.4■■■□□ 2.46
PLOD3-213ENST00000478264 CUL7Q14999 1698 aa30.39■■■□□ 2.46
PLOD3-213ENST00000478264 FHAD1B1AJZ9 1412 aa30.39■■■□□ 2.45
PLOD3-213ENST00000478264 CHD1O14646 1710 aa30.35■■■□□ 2.45
PLOD3-213ENST00000478264 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
PLOD3-213ENST00000478264 FBLN2P98095 1184 aa30.29■■■□□ 2.44
PLOD3-213ENST00000478264 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
PLOD3-213ENST00000478264 GRIN2AQ12879 1464 aa30.27■■■□□ 2.44
PLOD3-213ENST00000478264 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
PLOD3-213ENST00000478264 FAM9AQ8IZU1 332 aaPredicted RBP30.19■■■□□ 2.42
PLOD3-213ENST00000478264 PRXQ9BXM0 1461 aa30.18■■■□□ 2.42
PLOD3-213ENST00000478264 OSCARQ8IYS5 282 aa30.17■■■□□ 2.42
PLOD3-213ENST00000478264 RAPGEF2Q9Y4G8 1499 aa30.17■■■□□ 2.42
PLOD3-213ENST00000478264 NUP160Q12769 1436 aa30.12■■■□□ 2.41
PLOD3-213ENST00000478264 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
PLOD3-213ENST00000478264 KIF21BO75037 1637 aa30.05■■■□□ 2.4
PLOD3-213ENST00000478264 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
PLOD3-213ENST00000478264 KIAA0586Q9BVV6 1533 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms