RNA–Protein interactions for RNA: ENST00000477909.5

NXPE3-203, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-203ENST00000477909 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
NXPE3-203ENST00000477909 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
NXPE3-203ENST00000477909 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
NXPE3-203ENST00000477909 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
NXPE3-203ENST00000477909 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
NXPE3-203ENST00000477909 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
NXPE3-203ENST00000477909 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
NXPE3-203ENST00000477909 NACADO15069 1562 aa12.87□□□□□ -0.35
NXPE3-203ENST00000477909 SUPT5HO00267 1087 aaKnown RBP12.84□□□□□ -0.35
NXPE3-203ENST00000477909 ABCC9O60706 1549 aa12.74□□□□□ -0.37
NXPE3-203ENST00000477909 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
NXPE3-203ENST00000477909 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
NXPE3-203ENST00000477909 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
NXPE3-203ENST00000477909 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
NXPE3-203ENST00000477909 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
NXPE3-203ENST00000477909 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
NXPE3-203ENST00000477909 BAZ1AQ9NRL2 1556 aaPredicted RBP12.31□□□□□ -0.44
NXPE3-203ENST00000477909 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.44
NXPE3-203ENST00000477909 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
NXPE3-203ENST00000477909 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
NXPE3-203ENST00000477909 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
NXPE3-203ENST00000477909 WIZO95785 1651 aa12.21□□□□□ -0.45
NXPE3-203ENST00000477909 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
NXPE3-203ENST00000477909 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
NXPE3-203ENST00000477909 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
NXPE3-203ENST00000477909 HRCP23327 699 aa12.08□□□□□ -0.48
NXPE3-203ENST00000477909 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
NXPE3-203ENST00000477909 PCGF6Q9BYE7 350 aa11.96□□□□□ -0.49
NXPE3-203ENST00000477909 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
NXPE3-203ENST00000477909 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
NXPE3-203ENST00000477909 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
NXPE3-203ENST00000477909 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
NXPE3-203ENST00000477909 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
NXPE3-203ENST00000477909 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
NXPE3-203ENST00000477909 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
NXPE3-203ENST00000477909 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
NXPE3-203ENST00000477909 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
NXPE3-203ENST00000477909 NCAPD3P42695 1498 aa11.8□□□□□ -0.52
NXPE3-203ENST00000477909 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
NXPE3-203ENST00000477909 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
NXPE3-203ENST00000477909 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
NXPE3-203ENST00000477909 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
NXPE3-203ENST00000477909 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
NXPE3-203ENST00000477909 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
NXPE3-203ENST00000477909 SYNJ1O43426 1573 aa11.65□□□□□ -0.55
NXPE3-203ENST00000477909 EEA1Q15075 1411 aa11.62□□□□□ -0.55
NXPE3-203ENST00000477909 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
NXPE3-203ENST00000477909 KIF21BO75037 1637 aa11.6□□□□□ -0.55
NXPE3-203ENST00000477909 CFTRP13569 1480 aa11.59□□□□□ -0.55
NXPE3-203ENST00000477909 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
NXPE3-203ENST00000477909 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
NXPE3-203ENST00000477909 MYT1Q01538 1121 aa11.48□□□□□ -0.57
NXPE3-203ENST00000477909 SOGA1O94964 1423 aa11.48□□□□□ -0.57
NXPE3-203ENST00000477909 CUX1P39880 1505 aa11.47□□□□□ -0.57
NXPE3-203ENST00000477909 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
NXPE3-203ENST00000477909 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
NXPE3-203ENST00000477909 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
NXPE3-203ENST00000477909 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
NXPE3-203ENST00000477909 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
NXPE3-203ENST00000477909 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
NXPE3-203ENST00000477909 TNIKQ9UKE5 1360 aa11.39□□□□□ -0.59
NXPE3-203ENST00000477909 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
NXPE3-203ENST00000477909 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
NXPE3-203ENST00000477909 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
NXPE3-203ENST00000477909 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
NXPE3-203ENST00000477909 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
NXPE3-203ENST00000477909 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
NXPE3-203ENST00000477909 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
NXPE3-203ENST00000477909 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
NXPE3-203ENST00000477909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
NXPE3-203ENST00000477909 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
NXPE3-203ENST00000477909 CUL7Q14999 1698 aa11.27□□□□□ -0.6
NXPE3-203ENST00000477909 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.61
NXPE3-203ENST00000477909 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
NXPE3-203ENST00000477909 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
NXPE3-203ENST00000477909 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
NXPE3-203ENST00000477909 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
NXPE3-203ENST00000477909 RAPGEF2Q9Y4G8 1499 aa11.23□□□□□ -0.61
NXPE3-203ENST00000477909 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
NXPE3-203ENST00000477909 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
NXPE3-203ENST00000477909 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
NXPE3-203ENST00000477909 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
NXPE3-203ENST00000477909 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
NXPE3-203ENST00000477909 ACIN1Q9UKV3 1341 aaKnown RBP11.2□□□□□ -0.62
NXPE3-203ENST00000477909 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
NXPE3-203ENST00000477909 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
NXPE3-203ENST00000477909 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
NXPE3-203ENST00000477909 PBRM1Q86U86 1689 aa11.16□□□□□ -0.62
NXPE3-203ENST00000477909 CLIP1P30622 1438 aa11.16□□□□□ -0.62
NXPE3-203ENST00000477909 NESP48681 1621 aa11.15□□□□□ -0.62
NXPE3-203ENST00000477909 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
NXPE3-203ENST00000477909 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
NXPE3-203ENST00000477909 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
NXPE3-203ENST00000477909 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
NXPE3-203ENST00000477909 WDR62O43379 1518 aa11.13□□□□□ -0.63
NXPE3-203ENST00000477909 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
NXPE3-203ENST00000477909 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
NXPE3-203ENST00000477909 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
NXPE3-203ENST00000477909 IGF1RP08069 1367 aa11.1□□□□□ -0.63
NXPE3-203ENST00000477909 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms