RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 NISCHQ9Y2I1 1504 aa12.25□□□□□ -0.45
ARHGEF3-209ENST00000477833 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF3-209ENST00000477833 CHIC1Q5VXU3 224 aa11.59□□□□□ -0.55
ARHGEF3-209ENST00000477833 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
ARHGEF3-209ENST00000477833 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
ARHGEF3-209ENST00000477833 SENP3Q9H4L4 574 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF3-209ENST00000477833 ABCC9O60706 1549 aa10.19□□□□□ -0.78
ARHGEF3-209ENST00000477833 PHF23Q9BUL5 403 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF3-209ENST00000477833 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
ARHGEF3-209ENST00000477833 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
ARHGEF3-209ENST00000477833 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
ARHGEF3-209ENST00000477833 NACADO15069 1562 aa9.97□□□□□ -0.81
ARHGEF3-209ENST00000477833 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
ARHGEF3-209ENST00000477833 RB1CC1Q8TDY2 1594 aa9.89□□□□□ -0.83
ARHGEF3-209ENST00000477833 SCRIBQ14160 1630 aa9.88□□□□□ -0.83
ARHGEF3-209ENST00000477833 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
ARHGEF3-209ENST00000477833 BICRAQ9NZM4 1560 aa9.68□□□□□ -0.86
ARHGEF3-209ENST00000477833 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
ARHGEF3-209ENST00000477833 CECR2Q9BXF3 1484 aa9.55□□□□□ -0.88
ARHGEF3-209ENST00000477833 MROH2BQ7Z745 1585 aa9.49□□□□□ -0.89
ARHGEF3-209ENST00000477833 RSF1Q96T23 1441 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF3-209ENST00000477833 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
ARHGEF3-209ENST00000477833 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
ARHGEF3-209ENST00000477833 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF3-209ENST00000477833 FOXD1Q16676 465 aa9.42□□□□□ -0.9
ARHGEF3-209ENST00000477833 WIZO95785 1651 aa9.42□□□□□ -0.9
ARHGEF3-209ENST00000477833 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
ARHGEF3-209ENST00000477833 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
ARHGEF3-209ENST00000477833 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
ARHGEF3-209ENST00000477833 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
ARHGEF3-209ENST00000477833 ATAD2BQ9ULI0 1458 aa9.29□□□□□ -0.92
ARHGEF3-209ENST00000477833 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
ARHGEF3-209ENST00000477833 CC2D2AQ9P2K1 1620 aa9.23□□□□□ -0.93
ARHGEF3-209ENST00000477833 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
ARHGEF3-209ENST00000477833 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
ARHGEF3-209ENST00000477833 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
ARHGEF3-209ENST00000477833 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
ARHGEF3-209ENST00000477833 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
ARHGEF3-209ENST00000477833 ABCC8Q09428 1581 aa9□□□□□ -0.97
ARHGEF3-209ENST00000477833 CFTRP13569 1480 aa8.99□□□□□ -0.97
ARHGEF3-209ENST00000477833 PRDM2Q13029 1718 aa8.98□□□□□ -0.97
ARHGEF3-209ENST00000477833 NESP48681 1621 aa8.96□□□□□ -0.98
ARHGEF3-209ENST00000477833 PPP6R1Q9UPN7 881 aa8.94□□□□□ -0.98
ARHGEF3-209ENST00000477833 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
ARHGEF3-209ENST00000477833 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
ARHGEF3-209ENST00000477833 ADRA2BP18089 450 aa8.91□□□□□ -0.98
ARHGEF3-209ENST00000477833 LAMC3Q9Y6N6 1575 aa8.9□□□□□ -0.99
ARHGEF3-209ENST00000477833 WRNQ14191 1432 aaPredicted RBP eCLIP8.89□□□□□ -0.99
ARHGEF3-209ENST00000477833 CUX1P39880 1505 aa8.89□□□□□ -0.99
ARHGEF3-209ENST00000477833 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
ARHGEF3-209ENST00000477833 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
ARHGEF3-209ENST00000477833 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
ARHGEF3-209ENST00000477833 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
ARHGEF3-209ENST00000477833 KIF21AQ7Z4S6 1674 aa8.86□□□□□ -0.99
ARHGEF3-209ENST00000477833 PIAS4Q8N2W9 510 aaPredicted RBP8.86□□□□□ -0.99
ARHGEF3-209ENST00000477833 MSH5O43196 834 aa8.83□□□□□ -1
ARHGEF3-209ENST00000477833 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
ARHGEF3-209ENST00000477833 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
ARHGEF3-209ENST00000477833 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
ARHGEF3-209ENST00000477833 RUSC2Q8N2Y8 1516 aa8.8□□□□□ -1
ARHGEF3-209ENST00000477833 SOGA1O94964 1423 aa8.8□□□□□ -1
ARHGEF3-209ENST00000477833 PDS5BQ9NTI5 1447 aa8.79□□□□□ -1
ARHGEF3-209ENST00000477833 TOPBP1Q92547 1522 aa8.78□□□□□ -1
ARHGEF3-209ENST00000477833 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1
ARHGEF3-209ENST00000477833 FAM9AQ8IZU1 332 aaPredicted RBP8.75□□□□□ -1.01
ARHGEF3-209ENST00000477833 THOC2Q8NI27 1593 aaKnown RBP8.74□□□□□ -1.01
ARHGEF3-209ENST00000477833 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
ARHGEF3-209ENST00000477833 MRC2Q9UBG0 1479 aa8.74□□□□□ -1.01
ARHGEF3-209ENST00000477833 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
ARHGEF3-209ENST00000477833 RAD54L2Q9Y4B4 1467 aa8.71□□□□□ -1.01
ARHGEF3-209ENST00000477833 WDR62O43379 1518 aa8.71□□□□□ -1.01
ARHGEF3-209ENST00000477833 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
ARHGEF3-209ENST00000477833 EEA1Q15075 1411 aa8.69□□□□□ -1.02
ARHGEF3-209ENST00000477833 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
ARHGEF3-209ENST00000477833 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
ARHGEF3-209ENST00000477833 CUX2O14529 1486 aa8.68□□□□□ -1.02
ARHGEF3-209ENST00000477833 ABCA10Q8WWZ4 1543 aa8.67□□□□□ -1.02
ARHGEF3-209ENST00000477833 KIF21BO75037 1637 aa8.65□□□□□ -1.02
ARHGEF3-209ENST00000477833 ABCA5Q8WWZ7 1642 aa8.65□□□□□ -1.02
ARHGEF3-209ENST00000477833 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
ARHGEF3-209ENST00000477833 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
ARHGEF3-209ENST00000477833 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
ARHGEF3-209ENST00000477833 PRXQ9BXM0 1461 aa8.63□□□□□ -1.03
ARHGEF3-209ENST00000477833 RAPGEF2Q9Y4G8 1499 aa8.62□□□□□ -1.03
ARHGEF3-209ENST00000477833 ZNF608Q9ULD9 1512 aaPredicted RBP8.61□□□□□ -1.03
ARHGEF3-209ENST00000477833 GOLGA3Q08378 1498 aa8.61□□□□□ -1.03
ARHGEF3-209ENST00000477833 IGF1RP08069 1367 aa8.6□□□□□ -1.03
ARHGEF3-209ENST00000477833 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
ARHGEF3-209ENST00000477833 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
ARHGEF3-209ENST00000477833 IFT140Q96RY7 1462 aa8.59□□□□□ -1.03
ARHGEF3-209ENST00000477833 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
ARHGEF3-209ENST00000477833 ERICH3Q5RHP9 1530 aa8.59□□□□□ -1.03
ARHGEF3-209ENST00000477833 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
ARHGEF3-209ENST00000477833 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.04
ARHGEF3-209ENST00000477833 CUL7Q14999 1698 aa8.56□□□□□ -1.04
ARHGEF3-209ENST00000477833 TNIKQ9UKE5 1360 aa8.55□□□□□ -1.04
ARHGEF3-209ENST00000477833 ADAMTS12P58397 1594 aa8.55□□□□□ -1.04
ARHGEF3-209ENST00000477833 CARMIL1Q5VZK9 1371 aa8.54□□□□□ -1.04
ARHGEF3-209ENST00000477833 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
ARHGEF3-209ENST00000477833 GRIN2BQ13224 1484 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms