RNA–Protein interactions for RNA: ENST00000477700.1

RALGPS1-213, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 3

Gene RALGPS1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-213ENST00000477700 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
RALGPS1-213ENST00000477700 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
RALGPS1-213ENST00000477700 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
RALGPS1-213ENST00000477700 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
RALGPS1-213ENST00000477700 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
RALGPS1-213ENST00000477700 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
RALGPS1-213ENST00000477700 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
RALGPS1-213ENST00000477700 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
RALGPS1-213ENST00000477700 ABCC9O60706 1549 aa19.11■□□□□ 0.65
RALGPS1-213ENST00000477700 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
RALGPS1-213ENST00000477700 NACADO15069 1562 aa18.91■□□□□ 0.62
RALGPS1-213ENST00000477700 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
RALGPS1-213ENST00000477700 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
RALGPS1-213ENST00000477700 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
RALGPS1-213ENST00000477700 SCRIBQ14160 1630 aa18.51■□□□□ 0.55
RALGPS1-213ENST00000477700 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
RALGPS1-213ENST00000477700 FOXD1Q16676 465 aa18.3■□□□□ 0.52
RALGPS1-213ENST00000477700 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
RALGPS1-213ENST00000477700 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
RALGPS1-213ENST00000477700 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
RALGPS1-213ENST00000477700 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
RALGPS1-213ENST00000477700 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
RALGPS1-213ENST00000477700 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
RALGPS1-213ENST00000477700 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
RALGPS1-213ENST00000477700 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
RALGPS1-213ENST00000477700 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
RALGPS1-213ENST00000477700 WIZO95785 1651 aa17.68■□□□□ 0.42
RALGPS1-213ENST00000477700 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
RALGPS1-213ENST00000477700 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
RALGPS1-213ENST00000477700 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
RALGPS1-213ENST00000477700 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
RALGPS1-213ENST00000477700 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
RALGPS1-213ENST00000477700 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
RALGPS1-213ENST00000477700 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
RALGPS1-213ENST00000477700 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
RALGPS1-213ENST00000477700 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
RALGPS1-213ENST00000477700 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
RALGPS1-213ENST00000477700 MSH5O43196 834 aa17.31■□□□□ 0.36
RALGPS1-213ENST00000477700 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
RALGPS1-213ENST00000477700 CFTRP13569 1480 aa17.01■□□□□ 0.31
RALGPS1-213ENST00000477700 PRDM2Q13029 1718 aa16.98■□□□□ 0.31
RALGPS1-213ENST00000477700 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
RALGPS1-213ENST00000477700 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
RALGPS1-213ENST00000477700 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
RALGPS1-213ENST00000477700 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
RALGPS1-213ENST00000477700 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
RALGPS1-213ENST00000477700 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
RALGPS1-213ENST00000477700 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
RALGPS1-213ENST00000477700 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
RALGPS1-213ENST00000477700 NESP48681 1621 aa16.78■□□□□ 0.28
RALGPS1-213ENST00000477700 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
RALGPS1-213ENST00000477700 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
RALGPS1-213ENST00000477700 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
RALGPS1-213ENST00000477700 ADRA2BP18089 450 aa16.75■□□□□ 0.27
RALGPS1-213ENST00000477700 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
RALGPS1-213ENST00000477700 CUX1P39880 1505 aa16.7■□□□□ 0.26
RALGPS1-213ENST00000477700 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
RALGPS1-213ENST00000477700 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
RALGPS1-213ENST00000477700 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
RALGPS1-213ENST00000477700 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
RALGPS1-213ENST00000477700 EEA1Q15075 1411 aa16.57■□□□□ 0.24
RALGPS1-213ENST00000477700 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
RALGPS1-213ENST00000477700 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
RALGPS1-213ENST00000477700 SOGA1O94964 1423 aa16.53■□□□□ 0.24
RALGPS1-213ENST00000477700 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
RALGPS1-213ENST00000477700 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
RALGPS1-213ENST00000477700 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
RALGPS1-213ENST00000477700 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
RALGPS1-213ENST00000477700 WDR62O43379 1518 aa16.45■□□□□ 0.22
RALGPS1-213ENST00000477700 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
RALGPS1-213ENST00000477700 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
RALGPS1-213ENST00000477700 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
RALGPS1-213ENST00000477700 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
RALGPS1-213ENST00000477700 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
RALGPS1-213ENST00000477700 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
RALGPS1-213ENST00000477700 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
RALGPS1-213ENST00000477700 KIF21BO75037 1637 aa16.37■□□□□ 0.21
RALGPS1-213ENST00000477700 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
RALGPS1-213ENST00000477700 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
RALGPS1-213ENST00000477700 CUX2O14529 1486 aa16.35■□□□□ 0.21
RALGPS1-213ENST00000477700 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
RALGPS1-213ENST00000477700 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
RALGPS1-213ENST00000477700 ABCA5Q8WWZ7 1642 aa16.31■□□□□ 0.2
RALGPS1-213ENST00000477700 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
RALGPS1-213ENST00000477700 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
RALGPS1-213ENST00000477700 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
RALGPS1-213ENST00000477700 IGF1RP08069 1367 aa16.27■□□□□ 0.2
RALGPS1-213ENST00000477700 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
RALGPS1-213ENST00000477700 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
RALGPS1-213ENST00000477700 CUL7Q14999 1698 aa16.22■□□□□ 0.19
RALGPS1-213ENST00000477700 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
RALGPS1-213ENST00000477700 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
RALGPS1-213ENST00000477700 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
RALGPS1-213ENST00000477700 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
RALGPS1-213ENST00000477700 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
RALGPS1-213ENST00000477700 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
RALGPS1-213ENST00000477700 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
RALGPS1-213ENST00000477700 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
RALGPS1-213ENST00000477700 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
RALGPS1-213ENST00000477700 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms