RNA–Protein interactions for RNA: ENST00000477677.5

CTBS-204, Transcript of chitobiase, humanhuman

TSL 1 (best)

Gene CTBS, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTBS-204ENST00000477677 NISCHQ9Y2I1 1504 aa33.92■■■■□ 3.02
CTBS-204ENST00000477677 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
CTBS-204ENST00000477677 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
CTBS-204ENST00000477677 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
CTBS-204ENST00000477677 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
CTBS-204ENST00000477677 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
CTBS-204ENST00000477677 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
CTBS-204ENST00000477677 ABCC9O60706 1549 aa27.35■■□□□ 1.97
CTBS-204ENST00000477677 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
CTBS-204ENST00000477677 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
CTBS-204ENST00000477677 NACADO15069 1562 aa26.91■■□□□ 1.9
CTBS-204ENST00000477677 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
CTBS-204ENST00000477677 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
CTBS-204ENST00000477677 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
CTBS-204ENST00000477677 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
CTBS-204ENST00000477677 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
CTBS-204ENST00000477677 UNC13AQ9UPW8 1703 aa26.32■■□□□ 1.8
CTBS-204ENST00000477677 WIZO95785 1651 aa26.28■■□□□ 1.8
CTBS-204ENST00000477677 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
CTBS-204ENST00000477677 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
CTBS-204ENST00000477677 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
CTBS-204ENST00000477677 TRIM41Q8WV44 630 aa26.01■■□□□ 1.76
CTBS-204ENST00000477677 SMARCA4P51532 1647 aa25.95■■□□□ 1.75
CTBS-204ENST00000477677 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
CTBS-204ENST00000477677 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.73
CTBS-204ENST00000477677 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
CTBS-204ENST00000477677 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
CTBS-204ENST00000477677 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
CTBS-204ENST00000477677 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
CTBS-204ENST00000477677 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
CTBS-204ENST00000477677 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
CTBS-204ENST00000477677 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
CTBS-204ENST00000477677 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
CTBS-204ENST00000477677 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
CTBS-204ENST00000477677 HRCP23327 699 aa25.31■■□□□ 1.64
CTBS-204ENST00000477677 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
CTBS-204ENST00000477677 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
CTBS-204ENST00000477677 SOGA1O94964 1423 aa25.18■■□□□ 1.62
CTBS-204ENST00000477677 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
CTBS-204ENST00000477677 PPARGC1BQ86YN6 1023 aaKnown RBP25.09■■□□□ 1.61
CTBS-204ENST00000477677 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
CTBS-204ENST00000477677 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
CTBS-204ENST00000477677 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
CTBS-204ENST00000477677 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
CTBS-204ENST00000477677 HMGXB3Q12766 1538 aa24.87■■□□□ 1.57
CTBS-204ENST00000477677 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
CTBS-204ENST00000477677 EEA1Q15075 1411 aa24.84■■□□□ 1.57
CTBS-204ENST00000477677 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
CTBS-204ENST00000477677 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
CTBS-204ENST00000477677 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
CTBS-204ENST00000477677 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
CTBS-204ENST00000477677 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
CTBS-204ENST00000477677 BIVM-ERCC5R4GMW8 1640 aa24.63■■□□□ 1.53
CTBS-204ENST00000477677 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
CTBS-204ENST00000477677 CC2D2AQ9P2K1 1620 aa24.6■■□□□ 1.53
CTBS-204ENST00000477677 CFTRP13569 1480 aa24.6■■□□□ 1.53
CTBS-204ENST00000477677 KIF21BO75037 1637 aa24.6■■□□□ 1.53
CTBS-204ENST00000477677 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
CTBS-204ENST00000477677 CUX1P39880 1505 aa24.59■■□□□ 1.53
CTBS-204ENST00000477677 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.53
CTBS-204ENST00000477677 CLIP1P30622 1438 aa24.45■■□□□ 1.51
CTBS-204ENST00000477677 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
CTBS-204ENST00000477677 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
CTBS-204ENST00000477677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
CTBS-204ENST00000477677 ZEB1P37275 1124 aaPredicted RBP24.38■■□□□ 1.49
CTBS-204ENST00000477677 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
CTBS-204ENST00000477677 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
CTBS-204ENST00000477677 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
CTBS-204ENST00000477677 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
CTBS-204ENST00000477677 NESP48681 1621 aa24.26■■□□□ 1.47
CTBS-204ENST00000477677 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
CTBS-204ENST00000477677 CUX2O14529 1486 aa24.23■■□□□ 1.47
CTBS-204ENST00000477677 FGD5Q6ZNL6 1462 aa24.22■■□□□ 1.47
CTBS-204ENST00000477677 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
CTBS-204ENST00000477677 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
CTBS-204ENST00000477677 APLP2Q06481 763 aa24.17■■□□□ 1.46
CTBS-204ENST00000477677 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
CTBS-204ENST00000477677 IGF1RP08069 1367 aa24.11■■□□□ 1.45
CTBS-204ENST00000477677 HNRNPUL2Q1KMD3 747 aaKnown RBP24.09■■□□□ 1.45
CTBS-204ENST00000477677 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
CTBS-204ENST00000477677 TOPBP1Q92547 1522 aa24.02■■□□□ 1.43
CTBS-204ENST00000477677 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
CTBS-204ENST00000477677 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
CTBS-204ENST00000477677 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
CTBS-204ENST00000477677 KANK4Q5T7N3 995 aaPredicted RBP23.98■■□□□ 1.43
CTBS-204ENST00000477677 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
CTBS-204ENST00000477677 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
CTBS-204ENST00000477677 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
CTBS-204ENST00000477677 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
CTBS-204ENST00000477677 P3H3Q8IVL6 736 aa23.86■■□□□ 1.41
CTBS-204ENST00000477677 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
CTBS-204ENST00000477677 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
CTBS-204ENST00000477677 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
CTBS-204ENST00000477677 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
CTBS-204ENST00000477677 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
CTBS-204ENST00000477677 CUL7Q14999 1698 aa23.69■■□□□ 1.38
CTBS-204ENST00000477677 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
CTBS-204ENST00000477677 ITGAEP38570 1179 aa23.66■■□□□ 1.38
CTBS-204ENST00000477677 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
CTBS-204ENST00000477677 TIAM1Q13009 1591 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms