RNA–Protein interactions for RNA: ENST00000477651.5

TMEM44-213, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best)

Gene TMEM44, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-213ENST00000477651 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
TMEM44-213ENST00000477651 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
TMEM44-213ENST00000477651 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
TMEM44-213ENST00000477651 ABCC9O60706 1549 aa32.83■■■□□ 2.85
TMEM44-213ENST00000477651 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
TMEM44-213ENST00000477651 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
TMEM44-213ENST00000477651 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
TMEM44-213ENST00000477651 NACADO15069 1562 aa32■■■□□ 2.71
TMEM44-213ENST00000477651 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
TMEM44-213ENST00000477651 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
TMEM44-213ENST00000477651 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
TMEM44-213ENST00000477651 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
TMEM44-213ENST00000477651 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
TMEM44-213ENST00000477651 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
TMEM44-213ENST00000477651 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
TMEM44-213ENST00000477651 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
TMEM44-213ENST00000477651 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
TMEM44-213ENST00000477651 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
TMEM44-213ENST00000477651 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
TMEM44-213ENST00000477651 SMARCA4P51532 1647 aa30.23■■■□□ 2.43
TMEM44-213ENST00000477651 WIZO95785 1651 aa30.08■■■□□ 2.41
TMEM44-213ENST00000477651 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
TMEM44-213ENST00000477651 PEG3Q9GZU2 1588 aa29.84■■■□□ 2.37
TMEM44-213ENST00000477651 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
TMEM44-213ENST00000477651 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
TMEM44-213ENST00000477651 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
TMEM44-213ENST00000477651 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
TMEM44-213ENST00000477651 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
TMEM44-213ENST00000477651 NCAPD3P42695 1498 aa29.57■■■□□ 2.32
TMEM44-213ENST00000477651 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
TMEM44-213ENST00000477651 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
TMEM44-213ENST00000477651 DNAJC5BQ9UF47 199 aa29.31■■■□□ 2.28
TMEM44-213ENST00000477651 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
TMEM44-213ENST00000477651 CFTRP13569 1480 aa28.85■■■□□ 2.21
TMEM44-213ENST00000477651 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
TMEM44-213ENST00000477651 ABCC8Q09428 1581 aa28.76■■■□□ 2.19
TMEM44-213ENST00000477651 NESP48681 1621 aa28.75■■■□□ 2.19
TMEM44-213ENST00000477651 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
TMEM44-213ENST00000477651 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
TMEM44-213ENST00000477651 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
TMEM44-213ENST00000477651 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
TMEM44-213ENST00000477651 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
TMEM44-213ENST00000477651 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
TMEM44-213ENST00000477651 CUX1P39880 1505 aa28.39■■■□□ 2.13
TMEM44-213ENST00000477651 PDS5BQ9NTI5 1447 aa28.38■■■□□ 2.13
TMEM44-213ENST00000477651 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
TMEM44-213ENST00000477651 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
TMEM44-213ENST00000477651 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
TMEM44-213ENST00000477651 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
TMEM44-213ENST00000477651 URB2Q14146 1524 aaKnown RBP28.2■■■□□ 2.11
TMEM44-213ENST00000477651 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
TMEM44-213ENST00000477651 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
TMEM44-213ENST00000477651 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
TMEM44-213ENST00000477651 SOGA1O94964 1423 aa28.15■■■□□ 2.1
TMEM44-213ENST00000477651 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
TMEM44-213ENST00000477651 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
TMEM44-213ENST00000477651 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
TMEM44-213ENST00000477651 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
TMEM44-213ENST00000477651 POLA1P09884 1462 aaPredicted RBP28.03■■■□□ 2.08
TMEM44-213ENST00000477651 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
TMEM44-213ENST00000477651 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
TMEM44-213ENST00000477651 WDR62O43379 1518 aa27.94■■■□□ 2.06
TMEM44-213ENST00000477651 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
TMEM44-213ENST00000477651 EEA1Q15075 1411 aa27.85■■■□□ 2.05
TMEM44-213ENST00000477651 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
TMEM44-213ENST00000477651 CUX2O14529 1486 aa27.85■■■□□ 2.05
TMEM44-213ENST00000477651 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
TMEM44-213ENST00000477651 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
TMEM44-213ENST00000477651 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
TMEM44-213ENST00000477651 TARBP1Q13395 1621 aaKnown RBP27.79■■■□□ 2.04
TMEM44-213ENST00000477651 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
TMEM44-213ENST00000477651 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
TMEM44-213ENST00000477651 IFT140Q96RY7 1462 aa27.65■■■□□ 2.02
TMEM44-213ENST00000477651 IGF1RP08069 1367 aa27.64■■■□□ 2.02
TMEM44-213ENST00000477651 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.01
TMEM44-213ENST00000477651 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
TMEM44-213ENST00000477651 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.012e-6■■■■■ 31.6
TMEM44-213ENST00000477651 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
TMEM44-213ENST00000477651 KIF21BO75037 1637 aa27.58■■■□□ 2.01
TMEM44-213ENST00000477651 PRXQ9BXM0 1461 aa27.57■■■□□ 2
TMEM44-213ENST00000477651 RAPGEF2Q9Y4G8 1499 aa27.57■■■□□ 2
TMEM44-213ENST00000477651 GOLGA3Q08378 1498 aa27.53■■■□□ 2
TMEM44-213ENST00000477651 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
TMEM44-213ENST00000477651 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
TMEM44-213ENST00000477651 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
TMEM44-213ENST00000477651 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
TMEM44-213ENST00000477651 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.99
TMEM44-213ENST00000477651 CUL7Q14999 1698 aa27.4■■□□□ 1.98
TMEM44-213ENST00000477651 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
TMEM44-213ENST00000477651 TNIKQ9UKE5 1360 aa27.37■■□□□ 1.97
TMEM44-213ENST00000477651 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
TMEM44-213ENST00000477651 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
TMEM44-213ENST00000477651 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
TMEM44-213ENST00000477651 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
TMEM44-213ENST00000477651 RANGAP1P46060 587 aaPredicted RBP27.21■■□□□ 1.95
TMEM44-213ENST00000477651 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
TMEM44-213ENST00000477651 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
TMEM44-213ENST00000477651 CLIP1P30622 1438 aa27.1■■□□□ 1.93
TMEM44-213ENST00000477651 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
TMEM44-213ENST00000477651 FBLN2P98095 1184 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms